Geografía génica de Chile: Distribución regional de los aportes genéticos americanos, europeos y africanos
Background: The geographical distribution of genes plays a key role in genetic epidemiology. The Chilean population has three major stem groups (Native American, European and African). Aim: To estimate the regional rate of American, European and African admixture of the Chilean population. Subjects...
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Lenguaje: | Spanish / Castilian |
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Sociedad Médica de Santiago
2014
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Acceso en línea: | http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0034-98872014000300001 |
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oai:scielo:S0034-988720140003000012014-09-02Geografía génica de Chile: Distribución regional de los aportes genéticos americanos, europeos y africanosFuentes,MacarenaPulgar,IvánGallo,CarlaBortolini,María-CátiraCanizales-Quinteros,SamuelBedoya,GabrielGonzález-José,RolandoRuiz-Linares,AndrésRothhammer,Francisco American native continental ancestry group Chile Indians South American Background: The geographical distribution of genes plays a key role in genetic epidemiology. The Chilean population has three major stem groups (Native American, European and African). Aim: To estimate the regional rate of American, European and African admixture of the Chilean population. Subjects and Methods: Forty single nucleotide polymorphisms (SNP´s) which exhibit substantially different frequencies between Amerindian populations (ancestry-informative markers or AIM´s), were genotyped in a sample of 923 Chilean participants to estimate individual genetic ancestry. Results: The American, European and African individual average admixture estimates for the 15 Chilean Regions were relatively homogeneous and not statistically different. However, higher American components were found in northern and southern Chile and higher European components were found in central Chile. A negative correlation between African admixture and latitude was observed. On the average, American and European genetic contributions were similar and significantly higher than the African contribution. Weighted mean American, European and African genetic contributions of 44.34% ± 3 9%, 51.85% ± 5.44% and 3.81% ± 0.45%, were estimated. Fifty two percent of subjects harbor African genes. Individuals with Aymara and Mapuche surnames have an American admixture of 58.64% and 68.33%, respectively. Conclusions: Half of the Chilean population harbors African genes. Participants with Aymara and Mapuche surnames had a higher American genetic contribution than the general Chilean population. These results confirm the usefulness of surnames as a frst approximation to determine genetic ancestry.info:eu-repo/semantics/openAccessSociedad Médica de SantiagoRevista médica de Chile v.142 n.3 20142014-03-01text/htmlhttp://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0034-98872014000300001es10.4067/S0034-98872014000300001 |
institution |
Scielo Chile |
collection |
Scielo Chile |
language |
Spanish / Castilian |
topic |
American native continental ancestry group Chile Indians South American |
spellingShingle |
American native continental ancestry group Chile Indians South American Fuentes,Macarena Pulgar,Iván Gallo,Carla Bortolini,María-Cátira Canizales-Quinteros,Samuel Bedoya,Gabriel González-José,Rolando Ruiz-Linares,Andrés Rothhammer,Francisco Geografía génica de Chile: Distribución regional de los aportes genéticos americanos, europeos y africanos |
description |
Background: The geographical distribution of genes plays a key role in genetic epidemiology. The Chilean population has three major stem groups (Native American, European and African). Aim: To estimate the regional rate of American, European and African admixture of the Chilean population. Subjects and Methods: Forty single nucleotide polymorphisms (SNP´s) which exhibit substantially different frequencies between Amerindian populations (ancestry-informative markers or AIM´s), were genotyped in a sample of 923 Chilean participants to estimate individual genetic ancestry. Results: The American, European and African individual average admixture estimates for the 15 Chilean Regions were relatively homogeneous and not statistically different. However, higher American components were found in northern and southern Chile and higher European components were found in central Chile. A negative correlation between African admixture and latitude was observed. On the average, American and European genetic contributions were similar and significantly higher than the African contribution. Weighted mean American, European and African genetic contributions of 44.34% ± 3 9%, 51.85% ± 5.44% and 3.81% ± 0.45%, were estimated. Fifty two percent of subjects harbor African genes. Individuals with Aymara and Mapuche surnames have an American admixture of 58.64% and 68.33%, respectively. Conclusions: Half of the Chilean population harbors African genes. Participants with Aymara and Mapuche surnames had a higher American genetic contribution than the general Chilean population. These results confirm the usefulness of surnames as a frst approximation to determine genetic ancestry. |
author |
Fuentes,Macarena Pulgar,Iván Gallo,Carla Bortolini,María-Cátira Canizales-Quinteros,Samuel Bedoya,Gabriel González-José,Rolando Ruiz-Linares,Andrés Rothhammer,Francisco |
author_facet |
Fuentes,Macarena Pulgar,Iván Gallo,Carla Bortolini,María-Cátira Canizales-Quinteros,Samuel Bedoya,Gabriel González-José,Rolando Ruiz-Linares,Andrés Rothhammer,Francisco |
author_sort |
Fuentes,Macarena |
title |
Geografía génica de Chile: Distribución regional de los aportes genéticos americanos, europeos y africanos |
title_short |
Geografía génica de Chile: Distribución regional de los aportes genéticos americanos, europeos y africanos |
title_full |
Geografía génica de Chile: Distribución regional de los aportes genéticos americanos, europeos y africanos |
title_fullStr |
Geografía génica de Chile: Distribución regional de los aportes genéticos americanos, europeos y africanos |
title_full_unstemmed |
Geografía génica de Chile: Distribución regional de los aportes genéticos americanos, europeos y africanos |
title_sort |
geografía génica de chile: distribución regional de los aportes genéticos americanos, europeos y africanos |
publisher |
Sociedad Médica de Santiago |
publishDate |
2014 |
url |
http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0034-98872014000300001 |
work_keys_str_mv |
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