Characterization of the long-terminal repeat single-strand tail-binding site of Moloney-MuLV integrase by crosslinking
Processing of viral DNA by retroviral integrase leaves a dinucleotide single-strand overhang in the unprocessed strand. Previous studies have stressed the importance of the 5' single-stranded (ss) tail in the integration process. To characterize the ss-tail binding site on M-MuLV integrase, we...
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Sociedad de Biología de Chile
2008
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oai:scielo:S0716-976020080001000092008-08-21Characterization of the long-terminal repeat single-strand tail-binding site of Moloney-MuLV integrase by crosslinkingVERA,JORGEVALENZUELA,BEATRIZROTH,MÓNICA JLEÓN,ÓSCAR integrase retrovirus crosslinking Processing of viral DNA by retroviral integrase leaves a dinucleotide single-strand overhang in the unprocessed strand. Previous studies have stressed the importance of the 5' single-stranded (ss) tail in the integration process. To characterize the ss-tail binding site on M-MuLV integrase, we carried out crosslinking studies utilizing a disintegration substrate that mimics the covalent intermediate formed during integration. This substrate carried reactive groups at the 5' ss tail. A bromoacetyl derivative with a side chain of 6 A was crosslinked to the mutant IN 106-404, which lacks the N-terminal domain, yielding a crosslinked complex of 50 kDa. Treatment of IN 106-404 with N-ethylmaleimide (NEM) prevented crosslinking, suggesting that Cys209 was involved in the reaction. The reactivity of Cys209 was confirmed by crosslinking of a more specific derivative carrying maleimide groups that spans 8A approximately. In contrast, WT IN was not reactive, suggesting that the N-terminal domain modifies the reactivity of the Cys209 or the positioning of the crosslinker side chain. A similar oligonucleotide-carrying iodouridine at the 5'ss tail reacted with both IN 106-404 and WT IN upon UV irradiation. This reaction was also prevented by NEM, suggesting that the ss-tail positions near a peptide region that includes Cys209info:eu-repo/semantics/openAccessSociedad de Biología de ChileBiological Research v.41 n.1 20082008-01-01text/htmlhttp://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0716-97602008000100009en10.4067/S0716-97602008000100009 |
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Scielo Chile |
collection |
Scielo Chile |
language |
English |
topic |
integrase retrovirus crosslinking |
spellingShingle |
integrase retrovirus crosslinking VERA,JORGE VALENZUELA,BEATRIZ ROTH,MÓNICA J LEÓN,ÓSCAR Characterization of the long-terminal repeat single-strand tail-binding site of Moloney-MuLV integrase by crosslinking |
description |
Processing of viral DNA by retroviral integrase leaves a dinucleotide single-strand overhang in the unprocessed strand. Previous studies have stressed the importance of the 5' single-stranded (ss) tail in the integration process. To characterize the ss-tail binding site on M-MuLV integrase, we carried out crosslinking studies utilizing a disintegration substrate that mimics the covalent intermediate formed during integration. This substrate carried reactive groups at the 5' ss tail. A bromoacetyl derivative with a side chain of 6 A was crosslinked to the mutant IN 106-404, which lacks the N-terminal domain, yielding a crosslinked complex of 50 kDa. Treatment of IN 106-404 with N-ethylmaleimide (NEM) prevented crosslinking, suggesting that Cys209 was involved in the reaction. The reactivity of Cys209 was confirmed by crosslinking of a more specific derivative carrying maleimide groups that spans 8A approximately. In contrast, WT IN was not reactive, suggesting that the N-terminal domain modifies the reactivity of the Cys209 or the positioning of the crosslinker side chain. A similar oligonucleotide-carrying iodouridine at the 5'ss tail reacted with both IN 106-404 and WT IN upon UV irradiation. This reaction was also prevented by NEM, suggesting that the ss-tail positions near a peptide region that includes Cys209 |
author |
VERA,JORGE VALENZUELA,BEATRIZ ROTH,MÓNICA J LEÓN,ÓSCAR |
author_facet |
VERA,JORGE VALENZUELA,BEATRIZ ROTH,MÓNICA J LEÓN,ÓSCAR |
author_sort |
VERA,JORGE |
title |
Characterization of the long-terminal repeat single-strand tail-binding site of Moloney-MuLV integrase by crosslinking |
title_short |
Characterization of the long-terminal repeat single-strand tail-binding site of Moloney-MuLV integrase by crosslinking |
title_full |
Characterization of the long-terminal repeat single-strand tail-binding site of Moloney-MuLV integrase by crosslinking |
title_fullStr |
Characterization of the long-terminal repeat single-strand tail-binding site of Moloney-MuLV integrase by crosslinking |
title_full_unstemmed |
Characterization of the long-terminal repeat single-strand tail-binding site of Moloney-MuLV integrase by crosslinking |
title_sort |
characterization of the long-terminal repeat single-strand tail-binding site of moloney-mulv integrase by crosslinking |
publisher |
Sociedad de Biología de Chile |
publishDate |
2008 |
url |
http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0716-97602008000100009 |
work_keys_str_mv |
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1718441429319024640 |