Phylogenetic relationships among species of the subsection Dendrophlomis Bentham

This study used randomly amplified polymorphic DNA markers to determine genetic relationships among species of the subsection Dendrophlomis. Twenty accessions of the eleven Phlomis taxa were evaluated to determine genetic variability using fourteen ten mer primers selected from a 125 random oligonuc...

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Autores principales: Yuzbasioglu,Ertugrul, Dadandi,Mehmet Yasar
Lenguaje:English
Publicado: Pontificia Universidad Católica de Valparaíso 2008
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Acceso en línea:http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582008000400012
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spelling oai:scielo:S0717-345820080004000122009-06-16Phylogenetic relationships among species of the subsection Dendrophlomis BenthamYuzbasioglu,ErtugrulDadandi,Mehmet Yasar genetic diversity genetic relationships genetic variation Phlomis species RAPDs This study used randomly amplified polymorphic DNA markers to determine genetic relationships among species of the subsection Dendrophlomis. Twenty accessions of the eleven Phlomis taxa were evaluated to determine genetic variability using fourteen ten mer primers selected from a 125 random oligonucleotide set. These 14 selected primers generated 85 RAPD bands that ranged in size from 200 to 1200 base pairs. Of the total bands, 88% (75) were polymorphic among the samples. Genetic distances among accessions were computed to produce a dendrogram based on UPGMA. Genetic distances ranged from 0.133 (between P. amanica and P. monocephala) to 0.494 (between P. chimerae and P. lunariifolia). The UPGMA tree based on distances has two major groups. The first comprised 9 taxa that were clustered into two subgroups. The first subgroup consisted of P. viscosa, P. lycia, P. amanica and P. monocephala while the second comprised P. lunariifolia, P. bourgaei, P. longifolia var. longifolia, P. grandiflora var. grandiflora and P. grandiflora var. fimbrilligera. The second group comprised 2 species, P. leucophracta and P. chimerae. Species-specific bands were observed for P. lycia, P. leucophracta, P. lunariifolia, P. bourgaei, P. chimerae and P. longifolia var longifolia.info:eu-repo/semantics/openAccessPontificia Universidad Católica de ValparaísoElectronic Journal of Biotechnology v.11 n.4 20082008-10-01text/htmlhttp://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582008000400012en10.4067/S0717-34582008000400012
institution Scielo Chile
collection Scielo Chile
language English
topic genetic diversity
genetic relationships
genetic variation
Phlomis species
RAPDs
spellingShingle genetic diversity
genetic relationships
genetic variation
Phlomis species
RAPDs
Yuzbasioglu,Ertugrul
Dadandi,Mehmet Yasar
Phylogenetic relationships among species of the subsection Dendrophlomis Bentham
description This study used randomly amplified polymorphic DNA markers to determine genetic relationships among species of the subsection Dendrophlomis. Twenty accessions of the eleven Phlomis taxa were evaluated to determine genetic variability using fourteen ten mer primers selected from a 125 random oligonucleotide set. These 14 selected primers generated 85 RAPD bands that ranged in size from 200 to 1200 base pairs. Of the total bands, 88% (75) were polymorphic among the samples. Genetic distances among accessions were computed to produce a dendrogram based on UPGMA. Genetic distances ranged from 0.133 (between P. amanica and P. monocephala) to 0.494 (between P. chimerae and P. lunariifolia). The UPGMA tree based on distances has two major groups. The first comprised 9 taxa that were clustered into two subgroups. The first subgroup consisted of P. viscosa, P. lycia, P. amanica and P. monocephala while the second comprised P. lunariifolia, P. bourgaei, P. longifolia var. longifolia, P. grandiflora var. grandiflora and P. grandiflora var. fimbrilligera. The second group comprised 2 species, P. leucophracta and P. chimerae. Species-specific bands were observed for P. lycia, P. leucophracta, P. lunariifolia, P. bourgaei, P. chimerae and P. longifolia var longifolia.
author Yuzbasioglu,Ertugrul
Dadandi,Mehmet Yasar
author_facet Yuzbasioglu,Ertugrul
Dadandi,Mehmet Yasar
author_sort Yuzbasioglu,Ertugrul
title Phylogenetic relationships among species of the subsection Dendrophlomis Bentham
title_short Phylogenetic relationships among species of the subsection Dendrophlomis Bentham
title_full Phylogenetic relationships among species of the subsection Dendrophlomis Bentham
title_fullStr Phylogenetic relationships among species of the subsection Dendrophlomis Bentham
title_full_unstemmed Phylogenetic relationships among species of the subsection Dendrophlomis Bentham
title_sort phylogenetic relationships among species of the subsection dendrophlomis bentham
publisher Pontificia Universidad Católica de Valparaíso
publishDate 2008
url http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582008000400012
work_keys_str_mv AT yuzbasiogluertugrul phylogeneticrelationshipsamongspeciesofthesubsectiondendrophlomisbentham
AT dadandimehmetyasar phylogeneticrelationshipsamongspeciesofthesubsectiondendrophlomisbentham
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