Estimation of phylogenetic relationships of Phlomis species based on seed protein polymorphism

In this study, phylogenetic relationships among 39 Phlomis taxa were investigated based on seed protein profiles produced by sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE). A total of 21 polypeptide bands were scored, of which, 19 were polymorphic among the taxa of the genus P...

Descripción completa

Guardado en:

Detalles Bibliográficos
Autores principales:	Yüzbasioglu,Ertugrul, Dadandi,Mehmet Yasar, Özcan,Servet
Lenguaje:	English
Publicado:	Pontificia Universidad Católica de Valparaíso 2009
Materias:	Phlomis Phlomoides Phlomis taxa SDS-PAGE seed proteins
Acceso en línea:	http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582009000200002
Etiquetas:	Agregar Etiqueta Sin Etiquetas, Sea el primero en etiquetar este registro!

id	oai:scielo:S0717-34582009000200002
record_format	dspace
spelling	oai:scielo:S0717-345820090002000022009-10-20Estimation of phylogenetic relationships of Phlomis species based on seed protein polymorphismYüzbasioglu,ErtugrulDadandi,Mehmet YasarÖzcan,Servet Phlomis Phlomoides Phlomis taxa SDS-PAGE seed proteins In this study, phylogenetic relationships among 39 Phlomis taxa were investigated based on seed protein profiles produced by sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE). A total of 21 polypeptide bands were scored, of which, 19 were polymorphic among the taxa of the genus Phlomis. A distance matrix was generated from the similarity matrix which was computed by using Jaccard’s similarity coefficients, based on polymorphic bands and then an UPGMA tree was established through cluster analysis performed on the distance matrix. Genetic distances ranged from 0.00 to 0.50 within subsection Dendrophlomis; from 0.00 to 0.625 within subsection Gymnophlomis and from 0.00 to 0.769 within subsection Oxyphlomis. The UPGMA tree formed four groups. The topology of the tree is in agreement with the taxonomic view regarding the section Phlomis as it is divided into three subsections as Dendrophlomis, Gymnophlomis and Oxyphlomis based on morphological characters. The grouping pattern of the tree also indicated that subsection Dendrophlomis is more closely related to subsection Gymnophlomis than subsection Oxyphlomis.info:eu-repo/semantics/openAccessPontificia Universidad Católica de ValparaísoElectronic Journal of Biotechnology v.12 n.2 20092009-04-01text/htmlhttp://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582009000200002en10.4067/S0717-34582009000200002
institution	Scielo Chile
collection	Scielo Chile
language	English
topic	Phlomis Phlomoides Phlomis taxa SDS-PAGE seed proteins
spellingShingle	Phlomis Phlomoides Phlomis taxa SDS-PAGE seed proteins Yüzbasioglu,Ertugrul Dadandi,Mehmet Yasar Özcan,Servet Estimation of phylogenetic relationships of Phlomis species based on seed protein polymorphism
description	In this study, phylogenetic relationships among 39 Phlomis taxa were investigated based on seed protein profiles produced by sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE). A total of 21 polypeptide bands were scored, of which, 19 were polymorphic among the taxa of the genus Phlomis. A distance matrix was generated from the similarity matrix which was computed by using Jaccard’s similarity coefficients, based on polymorphic bands and then an UPGMA tree was established through cluster analysis performed on the distance matrix. Genetic distances ranged from 0.00 to 0.50 within subsection Dendrophlomis; from 0.00 to 0.625 within subsection Gymnophlomis and from 0.00 to 0.769 within subsection Oxyphlomis. The UPGMA tree formed four groups. The topology of the tree is in agreement with the taxonomic view regarding the section Phlomis as it is divided into three subsections as Dendrophlomis, Gymnophlomis and Oxyphlomis based on morphological characters. The grouping pattern of the tree also indicated that subsection Dendrophlomis is more closely related to subsection Gymnophlomis than subsection Oxyphlomis.
author	Yüzbasioglu,Ertugrul Dadandi,Mehmet Yasar Özcan,Servet
author_facet	Yüzbasioglu,Ertugrul Dadandi,Mehmet Yasar Özcan,Servet
author_sort	Yüzbasioglu,Ertugrul
title	Estimation of phylogenetic relationships of Phlomis species based on seed protein polymorphism
title_short	Estimation of phylogenetic relationships of Phlomis species based on seed protein polymorphism
title_full	Estimation of phylogenetic relationships of Phlomis species based on seed protein polymorphism
title_fullStr	Estimation of phylogenetic relationships of Phlomis species based on seed protein polymorphism
title_full_unstemmed	Estimation of phylogenetic relationships of Phlomis species based on seed protein polymorphism
title_sort	estimation of phylogenetic relationships of phlomis species based on seed protein polymorphism
publisher	Pontificia Universidad Católica de Valparaíso
publishDate	2009
url	http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0717-34582009000200002
work_keys_str_mv	AT yuzbasiogluertugrul estimationofphylogeneticrelationshipsofphlomisspeciesbasedonseedproteinpolymorphism AT dadandimehmetyasar estimationofphylogeneticrelationshipsofphlomisspeciesbasedonseedproteinpolymorphism AT ozcanservet estimationofphylogeneticrelationshipsofphlomisspeciesbasedonseedproteinpolymorphism
_version_	1718441796579622912

Estimation of phylogenetic relationships of Phlomis species based on seed protein polymorphism

Ejemplares similares