Representative Diatom and Coccolithophore Species Exhibit Divergent Responses throughout Simulated Upwelling Cycles

by Robert H. Lampe, Gustavo Hernandez, Yuan Yu Lin, Adrian Marchetti
Published 2021

Human Colon Mucosal Biofilms and Murine Host Communicate via Altered mRNA and microRNA Expression during Cancer

by Sarah Tomkovich, Raad Z. Gharaibeh, Christine M. Dejea, Jillian L. Pope, Jinmai Jiang, Kathryn Winglee, Josee Gauthier, Rachel C. Newsome, Ye Yang, Anthony A. Fodor, Thomas D. Schmittgen, Cynthia L. Sears, Christian Jobin
Published 2020

Comparative Transcriptome Analysis Shows Conserved Metabolic Regulation during Production of Secondary Metabolites in Filamentous Fungi

by Jens Christian Nielsen, Sylvain Prigent, Sietske Grijseels, Mhairi Workman, Boyang Ji, Jens Nielsen
Published 2019

Insect Transmission of Plant Pathogens: a Systems Biology Perspective

by Michelle Heck
Published 2018

Machine Learning-Based Identification of Potentially Novel Non-Alcoholic Fatty Liver Disease Biomarkers

by Roshan Shafiha, Basak Bahcivanci, Georgios V. Gkoutos, Animesh Acharjee
Published 2021

mSystems

Published 2017

Identification of transcriptomics biomarkers for the early prediction of the prognosis of septic shock from pneumopathies

by Songchang Shi, Xiaobin Pan, Hangwei Feng, Shujuan Zhang, Songjing Shi, Wei Lin
Published 2021

Genetic pathways underpinning hormonal stress responses in fish exposed to short- and long-term warm ocean temperatures

by Alexander Goikoetxea, Bastien Sadoul, Eva Blondeau-Bidet, Johan Aerts, Marie-Odile Blanc, Hugues Parrinello, Célia Barrachina, Marine Pratlong, Benjamin Geffroy
Published 2021

Transcriptomic Analysis of Listeria monocytogenes in Response to Bile Under Aerobic and Anaerobic Conditions

by Damayanti Chakravarty, Gyan Sahukhal, Mark Arick, Morgan L. Davis, Janet R. Donaldson
Published 2021

Cocultivation of Anaerobic Fungi with Rumen Bacteria Establishes an Antagonistic Relationship

by Candice L. Swift, Katherine B. Louie, Benjamin P. Bowen, Casey A. Hooker, Kevin V. Solomon, Vasanth Singan, Chris Daum, Christa P. Pennacchio, Kerrie Barry, Vaithiyalingam Shutthanandan, James E. Evans, Igor V. Grigoriev, Trent R. Northen, Michelle A. O’Malley
Published 2021

Multifactorial Role of Mitochondria in Echinocandin Tolerance Revealed by Transcriptome Analysis of Drug-Tolerant Cells

by Rocio Garcia-Rubio, Cristina Jimenez-Ortigosa, Lucius DeGregorio, Christopher Quinteros, Erika Shor, David S. Perlin
Published 2021

Comparative transcriptome analysis of coleorhiza development in japonica and Indica rice

by Tao Song, Debatosh Das, Neng-Hui Ye, Guan-Qun Wang, Fu-Yuan Zhu, Mo-Xian Chen, Feng Yang, Jian-Hua Zhang
Published 2021

Comparative Metabolomics and Transcriptomics Reveal Multiple Pathways Associated with Polymyxin Killing in <named-content content-type="genus-species">Pseudomonas aeruginosa</named...

by Mei-Ling Han, Yan Zhu, Darren J. Creek, Yu-Wei Lin, Alina D. Gutu, Paul Hertzog, Tony Purcell, Hsin-Hui Shen, Samuel M. Moskowitz, Tony Velkov, Jian Li
Published 2019

Persistent Interactions with Bacterial Symbionts Direct Mature-Host Cell Morphology and Gene Expression in the Squid-Vibrio Symbiosis

by Natacha Kremer, Eric J. Koch, Adil El Filali, Lawrence Zhou, Elizabeth A. C. Heath-Heckman, Edward G. Ruby, Margaret J. McFall-Ngai
Published 2018

Metabolic Responses to Polymyxin Treatment in <italic toggle="yes">Acinetobacter baumannii</italic> ATCC 19606: Integrating Transcriptomics and Metabolomics with Genome-Scale Metab...

by Yan Zhu, Jinxin Zhao, Mohd Hafidz Mahamad Maifiah, Tony Velkov, Falk Schreiber, Jian Li
Published 2019

Identification of African Swine Fever Virus Transcription within Peripheral Blood Mononuclear Cells of Acutely Infected Pigs

by Ann Sofie Olesen, Miyako Kodama, Louise Lohse, Francesc Accensi, Thomas Bruun Rasmussen, Christina M. Lazov, Morten T. Limborg, M. Thomas P. Gilbert, Anette Bøtner, Graham J. Belsham
Published 2021

Transcriptome Profiling of Dysregulated GPCRs Reveals Overlapping Patterns across Psychiatric Disorders and Age-Disease Interactions

by Roudabeh Vakil Monfared, Wedad Alhassen, Tri Minh Truong, Michael Angelo Maglalang Gonzales, Vincent Vachirakorntong, Siwei Chen, Pierre Baldi, Olivier Civelli, Amal Alachkar
Published 2021

Metabolism, HDACs, and HDAC Inhibitors: A Systems Biology Perspective

by Jacob King, Maya Patel, Sriram Chandrasekaran
Published 2021

Atribacteria Reproducing over Millions of Years in the Atlantic Abyssal Subseafloor

by Aurèle Vuillemin, Sergio Vargas, Ömer K. Coskun, Robert Pockalny, Richard W. Murray, David C. Smith, Steven D’Hondt, William D. Orsi
Published 2020

<italic toggle="yes">Mucor circinelloides</italic> Thrives inside the Phagosome through an Atf-Mediated Germination Pathway

by Carlos Pérez-Arques, María Isabel Navarro-Mendoza, Laura Murcia, Carlos Lax, Pablo Martínez-García, Joseph Heitman, Francisco E. Nicolás, Victoriano Garre
Published 2019