Phylogenetic Characterization Reveals Prevalent <named-content content-type="genus-species">Shigella flexneri</named-content> ST100 Clone in Beijing, China, 2005 to 2018

por Lang Yang, Bing Lü, Quanyi Wang, Kaiying Wang, Yanfeng Lin, Chaojie Yang, Shaofu Qiu, Peng Li, Hongbin Song
Publicado 2020

Culture-Independent Metagenomic Surveillance of Commercially Available Probiotics with High-Throughput Next-Generation Sequencing

por Jennifer N. Patro, Padmini Ramachandran, Tammy Barnaba, Mark K. Mammel, Jada L. Lewis, Christopher A. Elkins
Publicado 2016

<named-content content-type="genus-species">Paenibacillus odorifer</named-content>, the Predominant <italic toggle="yes">Paenibacillus</italic> Species Isolated from Milk in the Un...

por Sarah M. Beno, Rachel A. Cheng, Renato H. Orsi, Diana R. Duncan, Xiaodong Guo, Jasna Kovac, Laura M. Carroll, Nicole H. Martin, Martin Wiedmann
Publicado 2020

Comparative genomic analysis of clinical Candida glabrata isolates identifies multiple polymorphic loci that can improve existing multilocus sequence typing strategy

por A. Arastehfar, M. Marcet-Houben, F. Daneshnia, S.J. Taj-Aldeen, D. Batra, S.R. Lockhart, E. Shor, T. Gabaldón, D.S. Perlin
Publicado 2021

A novel missense mutation of the NAT10 gene in a juvenile Schnauzer dog with chronic respiratory tract infections

por Barry A. Hedgespeth, Adam J. Birkenheuer, Steven G. Friedenberg, Natasha J. Olby, Kathryn M. Meurs
Publicado 2021

Clinical RNA sequencing confirms compound heterozygous intronic variants in RYR1 in a patient with congenital myopathy, respiratory failure, neonatal brain hemorrhage, and d‐transp...

por Amelle Shillington, Alonso Zea Vera, Tanya Perry, Robert Hopkin, Cameron Thomas, David Cooper, Kristen Suhrie
Publicado 2021

Genetic Variation and the Distribution of Variant Types in the Horse

por S. A. Durward-Akhurst, R. J. Schaefer, B. Grantham, W. K. Carey, J. R. Mickelson, M. E. McCue
Publicado 2021

First Genomic Evidence of Dual African Swine Fever Virus Infection: Case Report from Recent and Historical Outbreaks in Sardinia

por Mariangela Stefania Fiori, Luca Ferretti, Matteo Floris, Federica Loi, Antonello Di Nardo, Anna Maria Sechi, Anna Ladu, Graziella Puggioni, Daria Sanna, Fabio Scarpa, Maria Luisa Sanna, Maria Paola Madrau, Claudia Torresi, Roberto Sirica, Eloisa Evangelista, Annalisa Oggiano, Silvia Dei Giudici
Publicado 2021

Impact of <i>Clostridioides difficile</i> Therapy on Nosocomial Acquisition of Vancomycin-Resistant Enterococci

por Carlos L. Correa-Martínez, Niklas C. J. Hagemeier, Neele J. Froböse, Stefanie Kampmeier
Publicado 2021

Simultaneous debut of spontaneous intestinal perforation in a pair of preterm monozygotic twins assessed by whole genome sequencing

por Nikolai Juul, Oliver Willacy, Mathilde Maagaard, Tina Olsen, Jakob Ek, Inge Ifaoui, Magdalena Fossum
Publicado 2022

Phylogenetics of a Fungal Invasion: Origins and Widespread Dispersal of White-Nose Syndrome

por Kevin P. Drees, Jeffrey M. Lorch, Sebastien J. Puechmaille, Katy L. Parise, Gudrun Wibbelt, Joseph R. Hoyt, Keping Sun, Ariunbold Jargalsaikhan, Munkhnast Dalannast, Jonathan M. Palmer, Daniel L. Lindner, A. Marm Kilpatrick, Talima Pearson, Paul S. Keim, David S. Blehert, Jeffrey T. Foster
Publicado 2017

Breaching Pathogeographic Barriers by the Bat White-Nose Fungus

por Johanna Rhodes, Matthew C. Fisher
Publicado 2018

Systematic Evaluation of Whole-Genome Sequencing Based Prediction of Antimicrobial Resistance in Campylobacter jejuni and C. coli

por Lisa M. Hodges, Eduardo N. Taboada, Adam Koziol, Steven Mutschall, Burton W. Blais, G. Douglas Inglis, Daniel Leclair, Catherine D. Carrillo
Publicado 2021

Editorial: Integrating Whole Genome Sequencing Into Source Attribution and Risk Assessment of Foodborne Bacterial Pathogens

por Frederique Pasquali, Daniel Remondini, Emma Louise Snary, Tine Hald, Laurent Guillier
Publicado 2021

A Deep-Learning Pipeline for TSS Coverage Imputation From Shallow Cell-Free DNA Sequencing

por Bo-Wei Han, Xu Yang, Shou-Fang Qu, Zhi-Wei Guo, Li-Min Huang, Kun Li, Kun Li, Guo-Jun Ouyang, Geng-Xi Cai, Geng-Xi Cai, Wei-Wei Xiao, Rong-Tao Weng, Shun Xu, Jie Huang, Xue-Xi Yang, Ying-Song Wu
Publicado 2021

Changing Molecular Epidemiology of <named-content content-type="genus-species">Vibrio cholerae</named-content> Outbreaks in Shanghai, China

por Dalong Hu, Zhiqiu Yin, Chao Yuan, Pan Yang, Chengqian Qian, Yi Wei, Si Zhang, Yuhui Wang, Jian Yuan, Meng Wang, Peter R. Reeves, Lihong Tu, Min Chen, Di Huang, Bin Liu
Publicado 2019

The Genetic Relatedness and Antimicrobial Resistance Patterns of Mastitis-Causing <i>Staphylococcus aureus</i> Strains Isolated from New Zealand Dairy Cattle

por Sabrina S. Greening, Ji Zhang, Anne C. Midwinter, David A. Wilkinson, Scott McDougall, M. Carolyn Gates, Nigel P. French
Publicado 2021

An Official Outbreak Investigation of Acute Haemorrhagic Diarrhoea in Dogs in Norway Points to <i>Providencia alcalifaciens</i> as a Likely Cause

por Hannah Joan Jørgensen, Mette Valheim, Camilla Sekse, Bjarne Asbjørn Bergsjø, Helene Wisløff, Simen Foyn Nørstebø, Ellen Skancke, Karin Lagesen, Anita Haug Haaland, Sabrina Rodriguez-Campos, Siri Kulberg Sjurseth, Merete Hofshagen, Jorun Jarp, Ole-Herman Tronerud, Gro Skøien Johannessen, Monica Heggelund, Sasja Rygg, Ellen Christensen, Mette Boye, Britt Gjerset, Morten Sandvik, Eiril Moen Soltvedt, Cecilia Wolff
Publicado 2021

<i>Campylobacter jejuni</i> in Different Canine Populations: Characteristics and Zoonotic Potential

por Maria-Leonor Lemos, Alexandra Nunes, Massimo Ancora, Cesare Cammà, Paulo Martins da Costa, Mónica Oleastro
Publicado 2021

Nonclonal Emergence of Colistin Resistance Associated with Mutations in the BasRS Two-Component System in <named-content content-type="genus-species">Escherichia coli</named-conten...

por Axel B. Janssen, Toby L. Bartholomew, Natalia P. Marciszewska, Marc J. M. Bonten, Rob J. L. Willems, Jose A. Bengoechea, Willem van Schaik
Publicado 2020