Predicting the evolution of sex on complex fitness landscapes.

par Dusan Misevic, Roger D Kouyos, Sebastian Bonhoeffer
Publié 2009

The role of recombination for the coevolutionary dynamics of HIV and the immune response.

par Rafal Mostowy, Roger D Kouyos, David Fouchet, Sebastian Bonhoeffer
Publié 2011

On being the right size: the impact of population size and stochastic effects on the evolution of drug resistance in hospitals and the community.

par Roger D Kouyos, Pia Abel Zur Wiesch, Sebastian Bonhoeffer
Publié 2011

Informed switching strongly decreases the prevalence of antibiotic resistance in hospital wards.

par Roger D Kouyos, Pia Abel Zur Wiesch, Sebastian Bonhoeffer
Publié 2011

Author Correction: Efficient microbial colony growth dynamics quantification with ColTapp, an automated image analysis application

par Julian Bär, Mathilde Boumasmoud, Roger D. Kouyos, Annelies S. Zinkernagel, Clément Vulin
Publié 2021

Similar impact of CD8+ T cell responses on early virus dynamics during SIV infections of rhesus macaques and sooty mangabeys.

par Roger D Kouyos, Shari N Gordon, Silvija I Staprans, Guido Silvestri, Roland R Regoes
Publié 2010

Estimating the fitness cost of escape from HLA presentation in HIV-1 protease and reverse transcriptase.

par Rafal Mostowy, Roger D Kouyos, Ilka Hoof, Trevor Hinkley, Mojgan Haddad, Jeannette M Whitcomb, Christos J Petropoulos, Can Keşmir, Sebastian Bonhoeffer
Publié 2012

Quantifying Variation in Bacterial Reproductive Fitness: a High-Throughput Method

par Pascal M. Frey, Julian Baer, Judith Bergada-Pijuan, Conor Lawless, Philipp K. Bühler, Roger D. Kouyos, Katherine P. Lemon, Annelies S. Zinkernagel, Silvio D. Brugger
Publié 2021

Assessing predicted HIV-1 replicative capacity in a clinical setting.

par Roger D Kouyos, Viktor von Wyl, Trevor Hinkley, Christos J Petropoulos, Mojgan Haddad, Jeannette M Whitcomb, Jürg Böni, Sabine Yerly, Cristina Cellerai, Thomas Klimkait, Huldrych F Günthard, Sebastian Bonhoeffer, Swiss HIV Cohort Study
Publié 2011

Assessing the drivers of syphilis among men who have sex with men in Switzerland reveals a key impact of screening frequency: A modelling study.

par Suraj Balakrishna, Luisa Salazar-Vizcaya, Axel J Schmidt, Viacheslav Kachalov, Katharina Kusejko, Maria Christine Thurnheer, Jan A Roth, Dunja Nicca, Matthias Cavassini, Manuel Battegay, Patrick Schmid, Enos Bernasconi, Huldrych F Günthard, Andri Rauch, Roger D Kouyos, Swiss HIV Cohort Study (SHCS)
Publié 2021

Assessing the drivers of syphilis among men who have sex with men in Switzerland reveals a key impact of screening frequency: A modelling study

par Suraj Balakrishna, Luisa Salazar-Vizcaya, Axel J. Schmidt, Viacheslav Kachalov, Katharina Kusejko, Maria Christine Thurnheer, Jan A. Roth, Dunja Nicca, Matthias Cavassini, Manuel Battegay, Patrick Schmid, Enos Bernasconi, Huldrych F. Günthard, Andri Rauch, Roger D. Kouyos, the Swiss HIV Cohort Study (SHCS)
Publié 2021

Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load.

par Samuel Alizon, Viktor von Wyl, Tanja Stadler, Roger D Kouyos, Sabine Yerly, Bernard Hirschel, Jürg Böni, Cyril Shah, Thomas Klimkait, Hansjakob Furrer, Andri Rauch, Pietro L Vernazza, Enos Bernasconi, Manuel Battegay, Philippe Bürgisser, Amalio Telenti, Huldrych F Günthard, Sebastian Bonhoeffer, Swiss HIV Cohort Study
Publié 2010

Data linkage to evaluate the long-term risk of HIV infection in individuals seeking post-exposure prophylaxis

par Frédérique Hovaguimian, Huldrych F. Günthard, Christoph Hauser, Anna Conen, Enos Bernasconi, Alexandra Calmy, Matthias Cavassini, Marco Seneghini, Alex Marzel, Henriette Heinrich, Alexandra Scherrer, Julien Riou, Adrian Spoerri, Kurt Schmidlin, Suraj Balakrishna, Dominique L. Braun, Silvana K. Rampini, Jan S. Fehr, Roger D. Kouyos, the Swiss HIV Cohort Study
Publié 2021

Distinct conformations of the HIV-1 V3 loop crown are targetable for broad neutralization

par Nikolas Friedrich, Emanuel Stiegeler, Matthias Glögl, Thomas Lemmin, Simon Hansen, Claus Kadelka, Yufan Wu, Patrick Ernst, Liridona Maliqi, Caio Foulkes, Mylène Morin, Mustafa Eroglu, Thomas Liechti, Branislav Ivan, Thomas Reinberg, Jonas V. Schaefer, Umut Karakus, Stephan Ursprung, Axel Mann, Peter Rusert, Roger D. Kouyos, John A. Robinson, Huldrych F. Günthard, Andreas Plückthun, Alexandra Trkola
Publié 2021

Heritability of the HIV-1 reservoir size and decay under long-term suppressive ART

par Chenjie Wan, Nadine Bachmann, Venelin Mitov, François Blanquart, Susana Posada Céspedes, Teja Turk, Kathrin Neumann, Niko Beerenwinkel, Jasmina Bogojeska, Jacques Fellay, Volker Roth, Jürg Böni, Matthieu Perreau, Thomas Klimkait, Sabine Yerly, Manuel Battegay, Laura Walti, Alexandra Calmy, Pietro Vernazza, Enos Bernasconi, Matthias Cavassini, Karin J. Metzner, Huldrych F. Günthard, Roger D. Kouyos, the Swiss HIV Cohort Study
Publié 2020

Determinants of HIV-1 reservoir size and long-term dynamics during suppressive ART

par Nadine Bachmann, Chantal von Siebenthal, Valentina Vongrad, Teja Turk, Kathrin Neumann, Niko Beerenwinkel, Jasmina Bogojeska, Jaques Fellay, Volker Roth, Yik Lim Kok, Christian W. Thorball, Alessandro Borghesi, Sonali Parbhoo, Mario Wieser, Jürg Böni, Matthieu Perreau, Thomas Klimkait, Sabine Yerly, Manuel Battegay, Andri Rauch, Matthias Hoffmann, Enos Bernasconi, Matthias Cavassini, Roger D. Kouyos, Huldrych F. Günthard, Karin J. Metzner, the Swiss HIV Cohort Study
Publié 2019

Multifactorial seroprofiling dissects the contribution of pre-existing human coronaviruses responses to SARS-CoV-2 immunity

par Irene A. Abela, Chloé Pasin, Magdalena Schwarzmüller, Selina Epp, Michèle E. Sickmann, Merle M. Schanz, Peter Rusert, Jacqueline Weber, Stefan Schmutz, Annette Audigé, Liridona Maliqi, Annika Hunziker, Maria C. Hesselman, Cyrille R. Niklaus, Jochen Gottschalk, Eméry Schindler, Alexander Wepf, Urs Karrer, Aline Wolfensberger, Silvana K. Rampini, Patrick M. Meyer Sauteur, Christoph Berger, Michael Huber, Jürg Böni, Dominique L. Braun, Maddalena Marconato, Markus G. Manz, Beat M. Frey, Huldrych F. Günthard, Roger D. Kouyos, Alexandra Trkola
Publié 2021