Curated BLAST for Genomes

por Morgan N. Price, Adam P. Arkin
Publicado 2019

PaperBLAST: Text Mining Papers for Information about Homologs

por Morgan N. Price, Adam P. Arkin
Publicado 2017

Weakly Deleterious Mutations and Low Rates of Recombination Limit the Impact of Natural Selection on Bacterial Genomes

por Morgan N. Price, Adam P. Arkin
Publicado 2015

GapMind: Automated Annotation of Amino Acid Biosynthesis

por Morgan N. Price, Adam M. Deutschbauer, Adam P. Arkin
Publicado 2020

A Simple, Cost-Effective, and Automation-Friendly Direct PCR Approach for Bacterial Community Analysis

por Fangchao Song, Jennifer V. Kuehl, Arjun Chandran, Adam P. Arkin
Publicado 2021

Conservation of Transcription Start Sites within Genes across a Bacterial Genus

por Wenjun Shao, Morgan N. Price, Adam M. Deutschbauer, Margaret F. Romine, Adam P. Arkin
Publicado 2014

HIV promoter integration site primarily modulates transcriptional burst size rather than frequency.

por Ron Skupsky, John C Burnett, Jonathan E Foley, David V Schaffer, Adam P Arkin
Publicado 2010

Control of stochastic gene expression by host factors at the HIV promoter.

por John C Burnett, Kathryn Miller-Jensen, Priya S Shah, Adam P Arkin, David V Schaffer
Publicado 2009

Programming mRNA decay to modulate synthetic circuit resource allocation

por Ophelia S. Venturelli, Mika Tei, Stefan Bauer, Leanne Jade G. Chan, Christopher J. Petzold, Adam P Arkin
Publicado 2017

Multiplexed CRISPR-Cas9-Based Genome Editing of <italic toggle="yes">Rhodosporidium toruloides</italic>

por Peter B. Otoupal, Masakazu Ito, Adam P. Arkin, Jon K. Magnuson, John M. Gladden, Jeffrey M. Skerker
Publicado 2019

Dual-barcoded shotgun expression library sequencing for high-throughput characterization of functional traits in bacteria

por Vivek K. Mutalik, Pavel S. Novichkov, Morgan N. Price, Trenton K. Owens, Mark Callaghan, Sean Carim, Adam M. Deutschbauer, Adam P. Arkin
Publicado 2019

Oxidative Pathways of Deoxyribose and Deoxyribonate Catabolism

por Morgan N. Price, Jayashree Ray, Anthony T. Iavarone, Hans K. Carlson, Elizabeth M. Ryan, Rex R. Malmstrom, Adam P. Arkin, Adam M. Deutschbauer
Publicado 2019

Effects of Genetic and Physiological Divergence on the Evolution of a Sulfate-Reducing Bacterium under Conditions of Elevated Temperature

por Megan L. Kempher, Xuanyu Tao, Rong Song, Bo Wu, David A. Stahl, Judy D. Wall, Adam P. Arkin, Aifen Zhou, Jizhong Zhou
Publicado 2020

A quantitative framework reveals ecological drivers of grassland microbial community assembly in response to warming

por Daliang Ning, Mengting Yuan, Linwei Wu, Ya Zhang, Xue Guo, Xishu Zhou, Yunfeng Yang, Adam P. Arkin, Mary K. Firestone, Jizhong Zhou
Publicado 2020

Magic Pools: Parallel Assessment of Transposon Delivery Vectors in Bacteria

por Hualan Liu, Morgan N. Price, Robert Jordan Waters, Jayashree Ray, Hans K. Carlson, Jacob S. Lamson, Romy Chakraborty, Adam P. Arkin, Adam M. Deutschbauer
Publicado 2018

Unintended Laboratory-Driven Evolution Reveals Genetic Requirements for Biofilm Formation by <italic toggle="yes">Desulfovibrio vulgaris</italic> Hildenborough

por Kara B. De León, Grant M. Zane, Valentine V. Trotter, Gregory P. Krantz, Adam P. Arkin, Gareth P. Butland, Peter J. Walian, Matthew W. Fields, Judy D. Wall
Publicado 2017

Rapid Quantification of Mutant Fitness in Diverse Bacteria by Sequencing Randomly Bar-Coded Transposons

por Kelly M. Wetmore, Morgan N. Price, Robert J. Waters, Jacob S. Lamson, Jennifer He, Cindi A. Hoover, Matthew J. Blow, James Bristow, Gareth Butland, Adam P. Arkin, Adam Deutschbauer
Publicado 2015

Novel Mechanism for Scavenging of Hypochlorite Involving a Periplasmic Methionine-Rich Peptide and Methionine Sulfoxide Reductase

por Ryan A. Melnyk, Matthew D. Youngblut, Iain C. Clark, Hans K. Carlson, Kelly M. Wetmore, Morgan N. Price, Anthony T. Iavarone, Adam M. Deutschbauer, Adam P. Arkin, John D. Coates
Publicado 2015

Genomewide and Enzymatic Analysis Reveals Efficient <sc>d</sc>-Galacturonic Acid Metabolism in the Basidiomycete Yeast <named-content content-type="genus-species">Rhodosporidium to...

por Ryan J. Protzko, Christina A. Hach, Samuel T. Coradetti, Magdalena A. Hackhofer, Sonja Magosch, Nils Thieme, Gina M. Geiselman, Adam P. Arkin, Jeffrey M. Skerker, John E. Dueber, J. Philipp Benz
Publicado 2019

Functional Genomics with a Comprehensive Library of Transposon Mutants for the Sulfate-Reducing Bacterium <named-content content-type="genus-species">Desulfovibrio alaskensis</name...

por Jennifer V. Kuehl, Morgan N. Price, Jayashree Ray, Kelly M. Wetmore, Zuelma Esquivel, Alexey E. Kazakov, Michelle Nguyen, Raquel Kuehn, Ronald W. Davis, Terry C. Hazen, Adam P. Arkin, Adam Deutschbauer
Publicado 2014