NIBBS-search for fast and accurate prediction of phenotype-biased metabolic systems.

by Matthew C Schmidt, Andrea M Rocha, Kanchana Padmanabhan, Yekaterina Shpanskaya, Jill Banfield, Kathleen Scott, James R Mihelcic, Nagiza F Samatova
Published 2012

Large Circular Plasmids from Groundwater Plasmidomes Span Multiple Incompatibility Groups and Are Enriched in Multimetal Resistance Genes

by Ankita Kothari, Yu-Wei Wu, John-Marc Chandonia, Marimikel Charrier, Lara Rajeev, Andrea M. Rocha, Dominique C. Joyner, Terry C. Hazen, Steven W. Singer, Aindrila Mukhopadhyay
Published 2019

Microbial Functional Gene Diversity Predicts Groundwater Contamination and Ecosystem Functioning

by Zhili He, Ping Zhang, Linwei Wu, Andrea M. Rocha, Qichao Tu, Zhou Shi, Bo Wu, Yujia Qin, Jianjun Wang, Qingyun Yan, Daniel Curtis, Daliang Ning, Joy D. Van Nostrand, Liyou Wu, Yunfeng Yang, Dwayne A. Elias, David B. Watson, Michael W. W. Adams, Matthew W. Fields, Eric J. Alm, Terry C. Hazen, Paul D. Adams, Adam P. Arkin, Jizhong Zhou
Published 2018

Natural Bacterial Communities Serve as Quantitative Geochemical Biosensors

by Mark B. Smith, Andrea M. Rocha, Chris S. Smillie, Scott W. Olesen, Charles Paradis, Liyou Wu, James H. Campbell, Julian L. Fortney, Tonia L. Mehlhorn, Kenneth A. Lowe, Jennifer E. Earles, Jana Phillips, Steve M. Techtmann, Dominique C. Joyner, Dwayne A. Elias, Kathryn L. Bailey, Richard A. Hurt, Sarah P. Preheim, Matthew C. Sanders, Joy Yang, Marcella A. Mueller, Scott Brooks, David B. Watson, Ping Zhang, Zhili He, Eric A. Dubinsky, Paul D. Adams, Adam P. Arkin, Matthew W. Fields, Jizhong Zhou, Eric J. Alm, Terry C. Hazen
Published 2015