Understanding Microbiome Stability in a Changing World

par Ashley Shade
Publié 2018

Exometabolite Dynamics over Stationary Phase Reveal Strain-Specific Responses

par John L. Chodkowski, Ashley Shade
Publié 2020

A Synthetic Community System for Probing Microbial Interactions Driven by Exometabolites

par John L. Chodkowski, Ashley Shade
Publié 2017

Trait-based community assembly and succession of the infant gut microbiome

par John Guittar, Ashley Shade, Elena Litchman
Publié 2019

Unexpected Diversity during Community Succession in the Apple Flower Microbiome

par Ashley Shade, Patricia S. McManus, Jo Handelsman
Publié 2013

16S rRNA/rRNA Gene Ratios and Cell Activity Staining Reveal Consistent Patterns of Microbial Activity in Plant-Associated Soil

par Alan W. Bowsher, Patrick J. Kearns, Ashley Shade
Publié 2019

RefSoil+: a Reference Database for Genes and Traits of Soil Plasmids

par Taylor K. Dunivin, Jinlyung Choi, Adina Howe, Ashley Shade
Publié 2019

Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops

par Keara L. Grady, Jackson W. Sorensen, Nejc Stopnisek, John Guittar, Ashley Shade
Publié 2019

Strategies for Building Computing Skills To Support Microbiome Analysis: a Five-Year Perspective from the EDAMAME Workshop

par Ashley Shade, Taylor K. Dunivin, Jinlyung Choi, Tracy K. Teal, Adina C. Howe
Publié 2019

Conditionally Rare Taxa Disproportionately Contribute to Temporal Changes in Microbial Diversity

par Ashley Shade, Stuart E. Jones, J. Gregory Caporaso, Jo Handelsman, Rob Knight, Noah Fierer, Jack A. Gilbert
Publié 2014

Erratum for Linz et al., “Bacterial Community Composition and Dynamics Spanning Five Years in Freshwater Bog Lakes”

par Alexandra M. Linz, Benjamin C. Crary, Ashley Shade, Sarah Owens, Jack A. Gilbert, Rob Knight, Katherine D. McMahon
Publié 2017

Bacterial Community Composition and Dynamics Spanning Five Years in Freshwater Bog Lakes

par Alexandra M. Linz, Benjamin C. Crary, Ashley Shade, Sarah Owens, Jack A. Gilbert, Rob Knight, Katherine D. McMahon
Publié 2017

Comparing gut resistome composition among patients with acute Campylobacter infections and healthy family members

par Zoe A. Hansen, Wonhee Cha, Brian Nohomovich, Duane W. Newton, Paul Lephart, Hossein Salimnia, Walid Khalife, Ashley Shade, James T. Rudrik, Shannon D. Manning
Publié 2021