Understanding Microbiome Stability in a Changing World

por Ashley Shade
Publicado 2018

Exometabolite Dynamics over Stationary Phase Reveal Strain-Specific Responses

por John L. Chodkowski, Ashley Shade
Publicado 2020

A Synthetic Community System for Probing Microbial Interactions Driven by Exometabolites

por John L. Chodkowski, Ashley Shade
Publicado 2017

Trait-based community assembly and succession of the infant gut microbiome

por John Guittar, Ashley Shade, Elena Litchman
Publicado 2019

Unexpected Diversity during Community Succession in the Apple Flower Microbiome

por Ashley Shade, Patricia S. McManus, Jo Handelsman
Publicado 2013

16S rRNA/rRNA Gene Ratios and Cell Activity Staining Reveal Consistent Patterns of Microbial Activity in Plant-Associated Soil

por Alan W. Bowsher, Patrick J. Kearns, Ashley Shade
Publicado 2019

RefSoil+: a Reference Database for Genes and Traits of Soil Plasmids

por Taylor K. Dunivin, Jinlyung Choi, Adina Howe, Ashley Shade
Publicado 2019

Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops

por Keara L. Grady, Jackson W. Sorensen, Nejc Stopnisek, John Guittar, Ashley Shade
Publicado 2019

Strategies for Building Computing Skills To Support Microbiome Analysis: a Five-Year Perspective from the EDAMAME Workshop

por Ashley Shade, Taylor K. Dunivin, Jinlyung Choi, Tracy K. Teal, Adina C. Howe
Publicado 2019

Conditionally Rare Taxa Disproportionately Contribute to Temporal Changes in Microbial Diversity

por Ashley Shade, Stuart E. Jones, J. Gregory Caporaso, Jo Handelsman, Rob Knight, Noah Fierer, Jack A. Gilbert
Publicado 2014

Erratum for Linz et al., “Bacterial Community Composition and Dynamics Spanning Five Years in Freshwater Bog Lakes”

por Alexandra M. Linz, Benjamin C. Crary, Ashley Shade, Sarah Owens, Jack A. Gilbert, Rob Knight, Katherine D. McMahon
Publicado 2017

Bacterial Community Composition and Dynamics Spanning Five Years in Freshwater Bog Lakes

por Alexandra M. Linz, Benjamin C. Crary, Ashley Shade, Sarah Owens, Jack A. Gilbert, Rob Knight, Katherine D. McMahon
Publicado 2017

Comparing gut resistome composition among patients with acute Campylobacter infections and healthy family members

por Zoe A. Hansen, Wonhee Cha, Brian Nohomovich, Duane W. Newton, Paul Lephart, Hossein Salimnia, Walid Khalife, Ashley Shade, James T. Rudrik, Shannon D. Manning
Publicado 2021