Endemic dengue associated with the co-circulation of multiple viral lineages and localized density-dependent transmission.

por Jayna Raghwani, Andrew Rambaut, Edward C Holmes, Vu Ty Hang, Tran Tinh Hien, Jeremy Farrar, Bridget Wills, Niall J Lennon, Bruce W Birren, Matthew R Henn, Cameron P Simmons
Publicado 2011

Evolutionary dynamics of the accessory genome of Listeria monocytogenes.

por Henk C den Bakker, Christopher A Desjardins, Allison D Griggs, Joseph E Peters, Qiandong Zeng, Sarah K Young, Chinnappa D Kodira, Chandri Yandava, Theresa A Hepburn, Brian J Haas, Bruce W Birren, Martin Wiedmann
Publicado 2013

Evolution of Invasion in a Diverse Set of <italic toggle="yes">Fusobacterium</italic> Species

por Abigail Manson McGuire, Kyla Cochrane, Allison D. Griggs, Brian J. Haas, Thomas Abeel, Qiandong Zeng, Justin B. Nice, Hanlon MacDonald, Bruce W. Birren, Bryan W. Berger, Emma Allen-Vercoe, Ashlee M. Earl
Publicado 2014

Comparative Genome Analysis of <italic toggle="yes">Trichophyton rubrum</italic> and Related Dermatophytes Reveals Candidate Genes Involved in Infection

por Diego A. Martinez, Brian G. Oliver, Yvonne Gräser, Jonathan M. Goldberg, Wenjun Li, Nilce M. Martinez-Rossi, Michel Monod, Ekaterina Shelest, Richard C. Barton, Elizabeth Birch, Axel A. Brakhage, Zehua Chen, Sarah J. Gurr, David Heiman, Joseph Heitman, Idit Kosti, Antonio Rossi, Sakina Saif, Marketa Samalova, Charles W. Saunders, Terrance Shea, Richard C. Summerbell, Jun Xu, Sarah Young, Qiandong Zeng, Bruce W. Birren, Christina A. Cuomo, Theodore C. White
Publicado 2012

Genome analysis of three Pneumocystis species reveals adaptation mechanisms to life exclusively in mammalian hosts

por Liang Ma, Zehua Chen, Da Wei Huang, Geetha Kutty, Mayumi Ishihara, Honghui Wang, Amr Abouelleil, Lisa Bishop, Emma Davey, Rebecca Deng, Xilong Deng, Lin Fan, Giovanna Fantoni, Michael Fitzgerald, Emile Gogineni, Jonathan M. Goldberg, Grace Handley, Xiaojun Hu, Charles Huber, Xiaoli Jiao, Kristine Jones, Joshua Z. Levin, Yueqin Liu, Pendexter Macdonald, Alexandre Melnikov, Castle Raley, Monica Sassi, Brad T. Sherman, Xiaohong Song, Sean Sykes, Bao Tran, Laura Walsh, Yun Xia, Jun Yang, Sarah Young, Qiandong Zeng, Xin Zheng, Robert Stephens, Chad Nusbaum, Bruce W. Birren, Parastoo Azadi, Richard A. Lempicki, Christina A. Cuomo, Joseph A. Kovacs
Publicado 2016

Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection.

por Matthew R Henn, Christian L Boutwell, Patrick Charlebois, Niall J Lennon, Karen A Power, Alexander R Macalalad, Aaron M Berlin, Christine M Malboeuf, Elizabeth M Ryan, Sante Gnerre, Michael C Zody, Rachel L Erlich, Lisa M Green, Andrew Berical, Yaoyu Wang, Monica Casali, Hendrik Streeck, Allyson K Bloom, Tim Dudek, Damien Tully, Ruchi Newman, Karen L Axten, Adrianne D Gladden, Laura Battis, Michael Kemper, Qiandong Zeng, Terrance P Shea, Sharvari Gujja, Carmen Zedlack, Olivier Gasser, Christian Brander, Christoph Hess, Huldrych F Günthard, Zabrina L Brumme, Chanson J Brumme, Suzane Bazner, Jenna Rychert, Jake P Tinsley, Ken H Mayer, Eric Rosenberg, Florencia Pereyra, Joshua Z Levin, Sarah K Young, Heiko Jessen, Marcus Altfeld, Bruce W Birren, Bruce D Walker, Todd M Allen
Publicado 2012