cual-id: Globally Unique, Correctable, and Human-Friendly Sample Identifiers for Comparative Omics Studies

by John H. Chase, Evan Bolyen, Jai Ram Rideout, J. Gregory Caporaso
Published 2016

q2-longitudinal: Longitudinal and Paired-Sample Analyses of Microbiome Data

by Nicholas A. Bokulich, Matthew R. Dillon, Yilong Zhang, Jai Ram Rideout, Evan Bolyen, Huilin Li, Paul S. Albert, J. Gregory Caporaso
Published 2018

mockrobiota: a Public Resource for Microbiome Bioinformatics Benchmarking

by Nicholas A. Bokulich, Jai Ram Rideout, William G. Mercurio, Arron Shiffer, Benjamin Wolfe, Corinne F. Maurice, Rachel J. Dutton, Peter J. Turnbaugh, Rob Knight, J. Gregory Caporaso
Published 2016