Decomposition of gene expression state space trajectories.

por Jessica C Mar, John Quackenbush
Publicado 2009

Why is there a lack of consensus on molecular subgroups of glioblastoma? Understanding the nature of biological and statistical variability in glioblastoma expression data.

por Nicholas F Marko, John Quackenbush, Robert J Weil
Publicado 2011

Multi-omic regulatory networks capture downstream effects of kinase inhibition in Mycobacterium tuberculosis

por Albert T. Young, Xavier Carette, Michaela Helmel, Hanno Steen, Robert N. Husson, John Quackenbush, John Platig
Publicado 2021

Significance analysis of prognostic signatures.

por Andrew H Beck, Nicholas W Knoblauch, Marco M Hefti, Jennifer Kaplan, Stuart J Schnitt, Aedin C Culhane, Markus S Schroeder, Thomas Risch, John Quackenbush, Benjamin Haibe-Kains
Publicado 2013

Gene expression signature of normal cell-of-origin predicts ovarian tumor outcomes.

por Melissa A Merritt, Stefan Bentink, Matthew Schwede, Marcin P Iwanicki, John Quackenbush, Terri Woo, Elin S Agoston, Ferenc Reinhardt, Christopher P Crum, Ross S Berkowitz, Samuel C Mok, Abigail E Witt, Michelle A Jones, Bin Wang, Tan A Ince
Publicado 2013

Multisystem Analysis of <italic toggle="yes">Mycobacterium tuberculosis</italic> Reveals Kinase-Dependent Remodeling of the Pathogen-Environment Interface

por Xavier Carette, John Platig, David C. Young, Michaela Helmel, Albert T. Young, Zhe Wang, Lakshmi-Prasad Potluri, Cameron Stuver Moody, Jumei Zeng, Sladjana Prisic, Joseph N. Paulson, Jan Muntel, Ashoka V. R. Madduri, Jorge Velarde, Jacob A. Mayfield, Christopher Locher, Tiansheng Wang, John Quackenbush, Kyu Y. Rhee, D. Branch Moody, Hanno Steen, Robert N. Husson
Publicado 2018

Poly-ligand profiling differentiates trastuzumab-treated breast cancer patients according to their outcomes

por Valeriy Domenyuk, Zoran Gatalica, Radhika Santhanam, Xixi Wei, Adam Stark, Patrick Kennedy, Brandon Toussaint, Symon Levenberg, Jie Wang, Nianqing Xiao, Richard Greil, Gabriel Rinnerthaler, Simon P. Gampenrieder, Amy B. Heimberger, Donald A. Berry, Anna Barker, John Quackenbush, John L. Marshall, George Poste, Jeffrey L. Vacirca, Gregory A. Vidal, Lee S. Schwartzberg, David D. Halbert, Andreas Voss, Daniel Magee, Mark R. Miglarese, Michael Famulok, Günter Mayer, David Spetzler
Publicado 2018

Viral perturbations of host networks reflect disease etiology.

por Natali Gulbahce, Han Yan, Amélie Dricot, Megha Padi, Danielle Byrdsong, Rachel Franchi, Deok-Sun Lee, Orit Rozenblatt-Rosen, Jessica C Mar, Michael A Calderwood, Amy Baldwin, Bo Zhao, Balaji Santhanam, Pascal Braun, Nicolas Simonis, Kyung-Won Huh, Karin Hellner, Miranda Grace, Alyce Chen, Renee Rubio, Jarrod A Marto, Nicholas A Christakis, Elliott Kieff, Frederick P Roth, Jennifer Roecklein-Canfield, James A Decaprio, Michael E Cusick, John Quackenbush, David E Hill, Karl Münger, Marc Vidal, Albert-László Barabási
Publicado 2012