Identification of functional differences in metabolic networks using comparative genomics and constraint-based models.

por Joshua J Hamilton, Jennifer L Reed
Publicado 2012

TaxAss: Leveraging a Custom Freshwater Database Achieves Fine-Scale Taxonomic Resolution

por Robin R. Rohwer, Joshua J. Hamilton, Ryan J. Newton, Katherine D. McMahon
Publicado 2018

Diagnosing and Predicting Mixed-Culture Fermentations with Unicellular and Guild-Based Metabolic Models

por Matthew J. Scarborough, Joshua J. Hamilton, Elizabeth A. Erb, Timothy J. Donohue, Daniel R. Noguera
Publicado 2020

Metatranscriptomic and Thermodynamic Insights into Medium-Chain Fatty Acid Production Using an Anaerobic Microbiome

por Matthew J. Scarborough, Christopher E. Lawson, Joshua J. Hamilton, Timothy J. Donohue, Daniel R. Noguera
Publicado 2018

Metabolic network analysis reveals microbial community interactions in anammox granules

por Christopher E. Lawson, Sha Wu, Ananda S. Bhattacharjee, Joshua J. Hamilton, Katherine D. McMahon, Ramesh Goel, Daniel R. Noguera
Publicado 2017

Model Communities Hint at Promiscuous Metabolic Linkages between Ubiquitous Free-Living Freshwater Bacteria

por Sarahi L. Garcia, Moritz Buck, Joshua J. Hamilton, Christian Wurzbacher, Hans-Peter Grossart, Katherine D. McMahon, Alexander Eiler
Publicado 2018

Design of synthetic human gut microbiome assembly and butyrate production

por Ryan L. Clark, Bryce M. Connors, David M. Stevenson, Susan E. Hromada, Joshua J. Hamilton, Daniel Amador-Noguez, Ophelia S. Venturelli
Publicado 2021

Metabolic Network Analysis and Metatranscriptomics Reveal Auxotrophies and Nutrient Sources of the Cosmopolitan Freshwater Microbial Lineage acI

por Joshua J. Hamilton, Sarahi L. Garcia, Brittany S. Brown, Ben O. Oyserman, Francisco Moya-Flores, Stefan Bertilsson, Rex R. Malmstrom, Katrina T. Forest, Katherine D. McMahon
Publicado 2017