Single-Cell Transcriptomics Reveal a Correlation between Genome Architecture and Gene Family Evolution in Ciliates

por Ying Yan, Xyrus X. Maurer-Alcalá, Rob Knight, Sergei L. Kosakovsky Pond, Laura A. Katz
Publicado 2019

An evolutionary-network model reveals stratified interactions in the V3 loop of the HIV-1 envelope.

por Art F Y Poon, Fraser I Lewis, Sergei L Kosakovsky Pond, Simon D W Frost
Publicado 2007

Full-Length Envelope Analyzer (FLEA): A tool for longitudinal analysis of viral amplicons.

por Kemal Eren, Steven Weaver, Robert Ketteringham, Morné Valentyn, Melissa Laird Smith, Venkatesh Kumar, Sanjay Mohan, Sergei L Kosakovsky Pond, Ben Murrell
Publicado 2018

Modeling HIV-1 drug resistance as episodic directional selection.

por Ben Murrell, Tulio de Oliveira, Chris Seebregts, Sergei L Kosakovsky Pond, Konrad Scheffler, Southern African Treatment and Resistance Network-SATuRN Consortium
Publicado 2012

Natural selection in the evolution of SARS-CoV-2 in bats created a generalist virus and highly capable human pathogen.

por Oscar A MacLean, Spyros Lytras, Steven Weaver, Joshua B Singer, Maciej F Boni, Philippe Lemey, Sergei L Kosakovsky Pond, David L Robertson
Publicado 2021

An evolutionary model-based algorithm for accurate phylogenetic breakpoint mapping and subtype prediction in HIV-1.

por Sergei L Kosakovsky Pond, David Posada, Eric Stawiski, Colombe Chappey, Art F Y Poon, Gareth Hughes, Esther Fearnhill, Mike B Gravenor, Andrew J Leigh Brown, Simon D W Frost
Publicado 2009