Modeling regulatory network topology improves genome-wide analyses of complex human traits

by Xiang Zhu, Zhana Duren, Wing Hung Wong
Published 2021

DC3 is a method for deconvolution and coupled clustering from bulk and single-cell genomics data

by Wanwen Zeng, Xi Chen, Zhana Duren, Yong Wang, Rui Jiang, Wing Hung Wong
Published 2019

hReg-CNCC reconstructs a regulatory network in human cranial neural crest cells and annotates variants in a developmental context

by Zhanying Feng, Zhana Duren, Ziyi Xiong, Sijia Wang, Fan Liu, Wing Hung Wong, Yong Wang
Published 2021

Unsupervised clustering and epigenetic classification of single cells

by Mahdi Zamanighomi, Zhixiang Lin, Timothy Daley, Xi Chen, Zhana Duren, Alicia Schep, William J. Greenleaf, Wing Hung Wong
Published 2018

Sc-compReg enables the comparison of gene regulatory networks between conditions using single-cell data

by Zhana Duren, Wenhui Sophia Lu, Joseph G. Arthur, Preyas Shah, Jingxue Xin, Francesca Meschi, Miranda Lin Li, Corey M. Nemec, Yifeng Yin, Wing Hung Wong
Published 2021

Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis

by Sayed Mohammad Ebrahim Sahraeian, Marghoob Mohiyuddin, Robert Sebra, Hagen Tilgner, Pegah T. Afshar, Kin Fai Au, Narges Bani Asadi, Mark B. Gerstein, Wing Hung Wong, Michael P. Snyder, Eric Schadt, Hugo Y. K. Lam
Published 2017

Sensitive detection of tumor mutations from blood and its application to immunotherapy prognosis

by Shuo Li, Zorawar S. Noor, Weihua Zeng, Mary L. Stackpole, Xiaohui Ni, Yonggang Zhou, Zuyang Yuan, Wing Hung Wong, Vatche G. Agopian, Steven M. Dubinett, Frank Alber, Wenyuan Li, Edward B. Garon, Xianghong Jasmine Zhou
Published 2021

Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation

by Jingxue Xin, Hui Zhang, Yaoxi He, Zhana Duren, Caijuan Bai, Lang Chen, Xin Luo, Dong-Sheng Yan, Chaoyu Zhang, Xiang Zhu, Qiuyue Yuan, Zhanying Feng, Chaoying Cui, Xuebin Qi, Ouzhuluobu, Wing Hung Wong, Yong Wang, Bing Su
Published 2020

Inferring loss-of-heterozygosity from unpaired tumors using high-density oligonucleotide SNP arrays.

by Rameen Beroukhim, Ming Lin, Yuhyun Park, Ke Hao, Xiaojun Zhao, Levi A Garraway, Edward A Fox, Ephraim P Hochberg, Ingo K Mellinghoff, Matthias D Hofer, Aurelien Descazeaud, Mark A Rubin, Matthew Meyerson, Wing Hung Wong, William R Sellers, Cheng Li
Published 2006