Long read, isoform aware sequencing of mouse nucleus accumbens after chronic cocaine treatment

par Molly Estill, Efrain Ribeiro, Nancy J. Francoeur, Melissa L. Smith, Robert Sebra, Szu-Ying Yeh, Ashley M. Cunningham, Eric J. Nestler, Li Shen
Publié 2021

Cell-to-Cell Variation in Defective Virus Expression and Effects on Host Responses during Influenza Virus Infection

par Chang Wang, Christian V. Forst, Tsui-wen Chou, Adam Geber, Minghui Wang, Wissam Hamou, Melissa Smith, Robert Sebra, Bin Zhang, Bin Zhou, Elodie Ghedin
Publié 2020

Intrahost Dynamics of Antiviral Resistance in Influenza A Virus Reflect Complex Patterns of Segment Linkage, Reassortment, and Natural Selection

par Matthew B. Rogers, Timothy Song, Robert Sebra, Benjamin D. Greenbaum, Marie-Eve Hamelin, Adam Fitch, Alan Twaddle, Lijia Cui, Edward C. Holmes, Guy Boivin, Elodie Ghedin
Publié 2015

ORF Capture-Seq as a versatile method for targeted identification of full-length isoforms

par Gloria M. Sheynkman, Katharine S. Tuttle, Florent Laval, Elizabeth Tseng, Jason G. Underwood, Liang Yu, Da Dong, Melissa L. Smith, Robert Sebra, Luc Willems, Tong Hao, Michael A. Calderwood, David E. Hill, Marc Vidal
Publié 2020

Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis

par Sayed Mohammad Ebrahim Sahraeian, Marghoob Mohiyuddin, Robert Sebra, Hagen Tilgner, Pegah T. Afshar, Kin Fai Au, Narges Bani Asadi, Mark B. Gerstein, Wing Hung Wong, Michael P. Snyder, Eric Schadt, Hugo Y. K. Lam
Publié 2017

The genome of a subterrestrial nematode reveals adaptations to heat

par Deborah J. Weinstein, Sarah E. Allen, Maggie C. Y. Lau, Mariana Erasmus, Kathryn C. Asalone, Kathryn Walters-Conte, Gintaras Deikus, Robert Sebra, Gaetan Borgonie, Esta van Heerden, Tullis C. Onstott, John R. Bracht
Publié 2019

Genetic variants associated with inherited cardiovascular disorders among 13,131 asymptomatic older adults of European descent

par Paul Lacaze, Robert Sebra, Moeen Riaz, Jodie Ingles, Jane Tiller, Bryony A. Thompson, Paul A. James, Diane Fatkin, Christopher Semsarian, Christopher M. Reid, Andrew M. Tonkin, Ingrid Winship, Eric Schadt, John J. McNeil
Publié 2021

The Complete Genome Sequence of the Emerging Pathogen <named-content content-type="genus-species">Mycobacterium haemophilum</named-content> Explains Its Unique Culture Requirements

par JoAnn M. Tufariello, Christopher A. Kerantzas, Catherine Vilchèze, R. Brent Calder, Eric K. Nordberg, Jack A. Fischer, Travis E. Hartman, Eva Yang, Timothy Driscoll, Laura E. Cole, Robert Sebra, Shahina B. Maqbool, Alice R. Wattam, William R. Jacobs
Publié 2015

Staphylococcus aureus induces an itaconate-dominated immunometabolic response that drives biofilm formation

par Kira L. Tomlinson, Tania Wong Fok Lung, Felix Dach, Medini K. Annavajhala, Stanislaw J. Gabryszewski, Ryan A. Groves, Marija Drikic, Nancy J. Francoeur, Shwetha H. Sridhar, Melissa L. Smith, Sara Khanal, Clemente J. Britto, Robert Sebra, Ian Lewis, Anne-Catrin Uhlemann, Barbara C. Kahl, Alice S. Prince, Sebastián A. Riquelme
Publié 2021

Evolutionary History of the Global Emergence of the <named-content content-type="genus-species">Escherichia coli</named-content> Epidemic Clone ST131

par Nicole Stoesser, Anna E. Sheppard, Louise Pankhurst, Nicola De Maio, Catrin E. Moore, Robert Sebra, Paul Turner, Luke W. Anson, Andrew Kasarskis, Elizabeth M. Batty, Veronica Kos, Daniel J. Wilson, Rattanaphone Phetsouvanh, David Wyllie, Evgeni Sokurenko, Amee R. Manges, Timothy J. Johnson, Lance B. Price, Timothy E. A. Peto, James R. Johnson, Xavier Didelot, A. Sarah Walker, Derrick W. Crook
Publié 2016

Molecular evidence of SARS-CoV-2 in New York before the first pandemic wave

par Matthew M. Hernandez, Ana S. Gonzalez-Reiche, Hala Alshammary, Shelcie Fabre, Zenab Khan, Adriana van De Guchte, Ajay Obla, Ethan Ellis, Mitchell J. Sullivan, Jessica Tan, Bremy Alburquerque, Juan Soto, Ching-Yi Wang, Shwetha Hara Sridhar, Ying-Chih Wang, Melissa Smith, Robert Sebra, Alberto E. Paniz-Mondolfi, Melissa R. Gitman, Michael D. Nowak, Carlos Cordon-Cardo, Marta Luksza, Florian Krammer, Harm van Bakel, Viviana Simon, Emilia Mia Sordillo
Publié 2021

Intratumoral heterogeneity and clonal evolution in liver cancer

par Bojan Losic, Amanda J. Craig, Carlos Villacorta-Martin, Sebastiao N. Martins-Filho, Nicholas Akers, Xintong Chen, Mehmet E. Ahsen, Johann von Felden, Ismail Labgaa, Delia DʹAvola, Kimaada Allette, Sergio A. Lira, Glaucia C. Furtado, Teresa Garcia-Lezana, Paula Restrepo, Ashley Stueck, Stephen C. Ward, Maria I. Fiel, Spiros P. Hiotis, Ganesh Gunasekaran, Daniela Sia, Eric E. Schadt, Robert Sebra, Myron Schwartz, Josep M. Llovet, Swan Thung, Gustavo Stolovitzky, Augusto Villanueva
Publié 2020

Downregulation of exhausted cytotoxic T cells in gene expression networks of multisystem inflammatory syndrome in children

par Noam D. Beckmann, Phillip H. Comella, Esther Cheng, Lauren Lepow, Aviva G. Beckmann, Scott R. Tyler, Konstantinos Mouskas, Nicole W. Simons, Gabriel E. Hoffman, Nancy J. Francoeur, Diane Marie Del Valle, Gurpawan Kang, Anh Do, Emily Moya, Lillian Wilkins, Jessica Le Berichel, Christie Chang, Robert Marvin, Sharlene Calorossi, Alona Lansky, Laura Walker, Nancy Yi, Alex Yu, Jonathan Chung, Matthew Hartnett, Melody Eaton, Sandra Hatem, Hajra Jamal, Alara Akyatan, Alexandra Tabachnikova, Lora E. Liharska, Liam Cotter, Brian Fennessy, Akhil Vaid, Guillermo Barturen, Hardik Shah, Ying-chih Wang, Shwetha Hara Sridhar, Juan Soto, Swaroop Bose, Kent Madrid, Ethan Ellis, Elyze Merzier, Konstantinos Vlachos, Nataly Fishman, Manying Tin, Melissa Smith, Hui Xie, Manishkumar Patel, Kai Nie, Kimberly Argueta, Jocelyn Harris, Neha Karekar, Craig Batchelor, Jose Lacunza, Mahlet Yishak, Kevin Tuballes, Ieisha Scott, Arvind Kumar, Suraj Jaladanki, Charuta Agashe, Ryan Thompson, Evan Clark, Bojan Losic, Lauren Peters, The Mount Sinai COVID-19 Biobank Team, Panagiotis Roussos, Jun Zhu, Wenhui Wang, Andrew Kasarskis, Benjamin S. Glicksberg, Girish Nadkarni, Dusan Bogunovic, Cordelia Elaiho, Sandeep Gangadharan, George Ofori-Amanfo, Kasey Alesso-Carra, Kenan Onel, Karen M. Wilson, Carmen Argmann, Supinda Bunyavanich, Marta E. Alarcón-Riquelme, Thomas U. Marron, Adeeb Rahman, Seunghee Kim-Schulze, Sacha Gnjatic, Bruce D. Gelb, Miriam Merad, Robert Sebra, Eric E. Schadt, Alexander W. Charney
Publié 2021