DOE JGI Metagenome Workflow
The DOE JGI Metagenome Workflow is designed for processing metagenomic data sets starting from Illumina fastq files. It performs data preprocessing, error correction, assembly, structural and functional annotation, and binning.
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| Lenguaje: | EN |
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American Society for Microbiology
2021
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| Acceso en línea: | https://doaj.org/article/06d53c16ba8d4db29707812c62731c25 |
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oai:doaj.org-article:06d53c16ba8d4db29707812c62731c252021-12-02T15:16:36ZDOE JGI Metagenome Workflow2379-507710.1128/mSystems.00804-20https://doaj.org/article/06d53c16ba8d4db29707812c62731c252021-06-01T00:00:00Zhttps://journals.asm.org/doi/10.1128/mSystems.00804-20https://doaj.org/toc/2379-5077 The DOE JGI Metagenome Workflow is designed for processing metagenomic data sets starting from Illumina fastq files. It performs data preprocessing, error correction, assembly, structural and functional annotation, and binning.Alicia ClumMarcel HuntemannBrian BushnellBrian FosterBryce FosterSimon RouxPatrick P. HajekNeha VargheseSupratim MukherjeeT. B. K. ReddyChris DaumYuko YoshinagaRonan O’MalleyRekha SeshadriNikos C. KyrpidesEmiley A. Eloe-FadroshI-Min A. ChenAlex CopelandNatalia N. IvanovaAmerican Society for MicrobiologyarticleMicrobiologyQR1-502ENmSystems, Vol 6, Iss 3 (2021) |
| institution |
DOAJ |
| collection |
DOAJ |
| language |
EN |
| topic |
Microbiology QR1-502 |
| spellingShingle |
Microbiology QR1-502 Alicia Clum Marcel Huntemann Brian Bushnell Brian Foster Bryce Foster Simon Roux Patrick P. Hajek Neha Varghese Supratim Mukherjee T. B. K. Reddy Chris Daum Yuko Yoshinaga Ronan O’Malley Rekha Seshadri Nikos C. Kyrpides Emiley A. Eloe-Fadrosh I-Min A. Chen Alex Copeland Natalia N. Ivanova DOE JGI Metagenome Workflow |
| description |
The DOE JGI Metagenome Workflow is designed for processing metagenomic data sets starting from Illumina fastq files. It performs data preprocessing, error correction, assembly, structural and functional annotation, and binning. |
| format |
article |
| author |
Alicia Clum Marcel Huntemann Brian Bushnell Brian Foster Bryce Foster Simon Roux Patrick P. Hajek Neha Varghese Supratim Mukherjee T. B. K. Reddy Chris Daum Yuko Yoshinaga Ronan O’Malley Rekha Seshadri Nikos C. Kyrpides Emiley A. Eloe-Fadrosh I-Min A. Chen Alex Copeland Natalia N. Ivanova |
| author_facet |
Alicia Clum Marcel Huntemann Brian Bushnell Brian Foster Bryce Foster Simon Roux Patrick P. Hajek Neha Varghese Supratim Mukherjee T. B. K. Reddy Chris Daum Yuko Yoshinaga Ronan O’Malley Rekha Seshadri Nikos C. Kyrpides Emiley A. Eloe-Fadrosh I-Min A. Chen Alex Copeland Natalia N. Ivanova |
| author_sort |
Alicia Clum |
| title |
DOE JGI Metagenome Workflow |
| title_short |
DOE JGI Metagenome Workflow |
| title_full |
DOE JGI Metagenome Workflow |
| title_fullStr |
DOE JGI Metagenome Workflow |
| title_full_unstemmed |
DOE JGI Metagenome Workflow |
| title_sort |
doe jgi metagenome workflow |
| publisher |
American Society for Microbiology |
| publishDate |
2021 |
| url |
https://doaj.org/article/06d53c16ba8d4db29707812c62731c25 |
| work_keys_str_mv |
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