Allele-specific binding of RNA-binding proteins reveals functional genetic variants in the RNA
Differential binding of RNA-binding proteins mediated by genetic variants (GVs) can influence posttranscriptional regulation. Here, the authors develop BEAPR, a computational approach to identify allele-specific binding events in eCLIP-Seq data.
Saved in:
Main Authors: | Ei-Wen Yang, Jae Hoon Bahn, Esther Yun-Hua Hsiao, Boon Xin Tan, Yiwei Sun, Ting Fu, Bo Zhou, Eric L. Van Nostrand, Gabriel A. Pratt, Peter Freese, Xintao Wei, Giovanni Quinones-Valdez, Alexander E. Urban, Brenton R. Graveley, Christopher B. Burge, Gene W. Yeo, Xinshu Xiao |
---|---|
Format: | article |
Language: | EN |
Published: |
Nature Portfolio
2019
|
Subjects: | |
Online Access: | https://doaj.org/article/40fe4f1d191643449b3e71a16d4eeda4 |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
-
Direct binding of TFEα opens DNA binding cleft of RNA polymerase
by: Sung-Hoon Jun, et al.
Published: (2020) -
Dysfunction of RNA/RNA-Binding Proteins in ALS Astrocytes and Microglia
by: Simona Rossi, et al.
Published: (2021) -
The regulatory impact of RNA-binding proteins on microRNA targeting
by: Sukjun Kim, et al.
Published: (2021) -
The structural basis for RNA selectivity by the IMP family of RNA-binding proteins
by: Jeetayu Biswas, et al.
Published: (2019) -
The Sox2 transcription factor binds RNA
by: Zachariah E. Holmes, et al.
Published: (2020)