Development of genic-SSR markers and their application in revealing genetic diversity and population structure in an Eastern and North-Eastern Indian collection of Jack (Artocarpus heterophyllus Lam.)

Development of genic-SSR markers and their application in revealing genetic diversity and population structure in an Eastern and North-Eastern Indian collection of Jack (Artocarpus heterophyllus Lam.)

Jack (Artocarpus heterophyllus) is a multi-purpose out-breeding tree species of the family Moraceae. We generated 42,928,887 high-quality expressed sequence reads, assembled them into 89,356 unigenes, and discovered 16,853 unigene-based perfect SSRs in A. heterophyllus. Thirty-eight polymorphic SSRs...

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Main Authors: Devendra K. Singh, Avinash Pandey, Shashi Bhushan Choudhary, Sudhir Kumar, Kishor U. Tribhuvan, Dwijesh C. Mishra, Jyotika Bhati, Madan Kumar, J.B. Tomar, S.K. Bishnoi, M.A. Mallick, V.P. Bhadana, T.R. Sharma, A. Pattanayak, Binay K. Singh
Format: article
Language:EN
Published: Elsevier 2021
Subjects:
Moraceae
Transcriptome
Illumina sequencing
Molecular markers
Genetic variation
Ecology
QH540-549.5
Online Access:https://doaj.org/article/519e668bffa3461494f41ef4d905b496
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https://doaj.org/article/519e668bffa3461494f41ef4d905b496

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