Fast and sensitive alignment of microbial whole genome sequencing reads to large sequence datasets on a desktop PC: application to metagenomic datasets and pathogen identification.

Next generation sequencing (NGS) of metagenomic samples is becoming a standard approach to detect individual species or pathogenic strains of microorganisms. Computer programs used in the NGS community have to balance between speed and sensitivity and as a result, species or strain level identificat...

Full description

Saved in:
Bibliographic Details
Main Authors: Lőrinc S Pongor, Roberto Vera, Balázs Ligeti
Format: article
Language:EN
Published: Public Library of Science (PLoS) 2014
Subjects:
R
Q
Online Access:https://doaj.org/article/61c68f04868048e1ae46cf9d57e56620
Tags: Add Tag
No Tags, Be the first to tag this record!