phyloFlash: Rapid Small-Subunit rRNA Profiling and Targeted Assembly from Metagenomes

ABSTRACT The small-subunit rRNA (SSU rRNA) gene is the key marker in molecular ecology for all domains of life, but it is largely absent from metagenome-assembled genomes that often are the only resource available for environmental microbes. Here, we present phyloFlash, a pipeline to overcome this g...

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Autores principales: Harald R. Gruber-Vodicka, Brandon K. B. Seah, Elmar Pruesse
Formato: article
Lenguaje:EN
Publicado: American Society for Microbiology 2020
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SSU
Acceso en línea:https://doaj.org/article/62e65737d0f24c2bbc340a5ce90c8a30
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