Introducing SPeDE: High-Throughput Dereplication and Accurate Determination of Microbial Diversity from Matrix-Assisted Laser Desorption–Ionization Time of Flight Mass Spectrometry Data

Introducing SPeDE: High-Throughput Dereplication and Accurate Determination of Microbial Diversity from Matrix-Assisted Laser Desorption–Ionization Time of Flight Mass Spectrometry Data

ABSTRACT The isolation of microorganisms from microbial community samples often yields a large number of conspecific isolates. Increasing the diversity covered by an isolate collection entails the implementation of methods and protocols to minimize the number of redundant isolates. Matrix-assisted l...

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Bibliographic Details
Main Authors: Charles Dumolin, Maarten Aerts, Bart Verheyde, Simon Schellaert, Tim Vandamme, Felix Van der Jeugt, Evelien De Canck, Margo Cnockaert, Anneleen D. Wieme, Ilse Cleenwerck, Jindrich Peiren, Peter Dawyndt, Peter Vandamme, Aurélien Carlier
Format: article
Language:EN
Published: American Society for Microbiology 2019
Subjects:
bioinformatics
MALDI-TOF MS
dereplication
microbial ecology
Microbiology
QR1-502
Online Access:https://doaj.org/article/e77ff3e9251f4d39ae16f6485fa97af1
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