TRIMER: Transcription Regulation Integrated with Metabolic Regulation

by Puhua Niu, Maria J. Soto, Byung-Jun Yoon, Edward R. Dougherty, Francis J. Alexander, Ian Blaby, Xiaoning Qian
Published 2021

Maturation trajectories and transcriptional landscape of plasmablasts and autoreactive B cells in COVID-19

by Christoph Schultheiß, Lisa Paschold, Edith Willscher, Donjete Simnica, Anna Wöstemeier, Franziska Muscate, Maxi Wass, Stephan Eisenmann, Jochen Dutzmann, Gernot Keyßer, Nicola Gagliani, Mascha Binder
Published 2021

Host and Parasite Transcriptomic Changes upon Successive <named-content content-type="genus-species">Plasmodium falciparum</named-content> Infections in Early Childhood

by Katie R. Bradwell, Drissa Coulibaly, Abdoulaye K. Koné, Matthew B. Laurens, Ahmadou Dembélé, Youssouf Tolo, Karim Traoré, Amadou Niangaly, Andrea A. Berry, Bourema Kouriba, Christopher V. Plowe, Ogobara K. Doumbo, Kirsten E. Lyke, Shannon Takala-Harrison, Mahamadou A. Thera, Mark A. Travassos, David Serre
Published 2020

DNA repair enzyme NEIL3 enables a stable neural representation of space by shaping transcription in hippocampal neurons

by Nicolas Kunath, Anna Maria Bugaj, Pegah Bigonah, Marion Silvana Fernandez-Berrocal, Magnar Bjørås, Jing Ye
Published 2021

Emerging Technologies to Study the Glomerular Filtration Barrier

by Emma Gong, Laura Perin, Laura Perin, Stefano Da Sacco, Stefano Da Sacco, Sargis Sedrakyan, Sargis Sedrakyan
Published 2021

Differential gene expression in Pyropia columbina (Bangiales, Rhodophyta) under natural hydration and desiccation conditions

by Contreras-Porcia,Loretto, López-Cristoffanini,Camilo, Lovazzano,Carlos, Flores-Molina,María Rosa, Thomas,Daniela, Núñez,Alejandra, Fierro,Camila, Guajardo,Eduardo, Correa,Juan A, Kube,Michael, Reinhardt,Richard
Published 2013

Caught between Two Genes: Accounting for Operonic Gene Structure Improves Prokaryotic RNA Sequencing Quantification

by Taylor Reiter
Published 2021

Clades of Photosynthetic Bacteria Belonging to the Genus <italic toggle="yes">Rhodopseudomonas</italic> Show Marked Diversity in Light-Harvesting Antenna Complex Gene Composition a...

by Kathryn R. Fixen, Yasuhiro Oda, Caroline S. Harwood
Published 2016

Miscell: An efficient self-supervised learning approach for dissecting single-cell transcriptome

by Hongru Shen, Yang Li, Mengyao Feng, Xilin Shen, Dan Wu, Chao Zhang, Yichen Yang, Meng Yang, Jiani Hu, Jilei Liu, Wei Wang, Qiang Zhang, Fangfang Song, Jilong Yang, Kexin Chen, Xiangchun Li
Published 2021

Prediction of RNA subcellular localization: Learning from heterogeneous data sources

by Anca Flavia Savulescu, Emmanuel Bouilhol, Nicolas Beaume, Macha Nikolski
Published 2021

Single-cell RNA transcriptome landscape of hepatocytes and non-parenchymal cells in healthy and NAFLD mouse liver

by Qi Su, Sun Y. Kim, Funmi Adewale, Ye Zhou, Christina Aldler, Min Ni, Yi Wei, Michael E. Burczynski, Gurinder S. Atwal, Mark W. Sleeman, Andrew J. Murphy, Yurong Xin, Xiping Cheng
Published 2021

Microglial transcription profiles in mouse and human are driven by APOE4 and sex

by V. Alexandra Moser, Michael J. Workman, Samantha J. Hurwitz, Rachel M. Lipman, Christian J. Pike, Clive N. Svendsen
Published 2021

Complex Responses to Hydrogen Peroxide and Hypochlorous Acid by the Probiotic Bacterium <named-content content-type="genus-species">Lactobacillus reuteri</named-content>

by Poulami Basu Thakur, Abagail R. Long, Benjamin J. Nelson, Ranjit Kumar, Alexander F. Rosenberg, Michael J. Gray
Published 2019

mSphere of Influence: the Importance of Metabolism for Pathogen Adaptation to Host-Imposed Stresses

by Jorge Amich
Published 2019

Cross-species transcriptomic signatures predict response to MK2 inhibition in mouse models of chronic inflammation

by Lucia Suarez-Lopez, Bing Shui, Douglas K. Brubaker, Marza Hill, Alexander Bergendorf, Paul S. Changelian, Aisha Laguna, Alina Starchenko, Douglas A. Lauffenburger, Kevin M. Haigis
Published 2021

How many markers are needed to robustly determine a cell's type?

by Stephan Fischer, Jesse Gillis
Published 2021

A model of impaired Langerhans cell maturation associated with HPV induced epithelial hyperplasia

by Zewen K. Tuong, Samuel W. Lukowski, Quan H. Nguyen, Janin Chandra, Chenhao Zhou, Kevin Gillinder, Abate A. Bashaw, John R. Ferdinand, Benjamin J. Stewart, Siok Min Teoh, Sarah J. Hanson, Katharina Devitt, Menna R. Clatworthy, Joseph E. Powell, Ian H. Frazer
Published 2021

Carausius morosus(Phasmatodea) Homologues of Human Genes withElevated Expression in the Colon

by Matan Shelomi
Published 2019

Attention to time-of-day variability improves the reproducibility of gene expression patterns in multiple sclerosis

by Suihong Huang, Tan Wu, Alexander Y. Lau, Cheryl Au, Hao Huang, Xin Wang, Jin Young Kim
Published 2021

SDG2 regulates Arabidopsis inflorescence architecture through SWR1-ERECTA signaling pathway

by Liping Liu, Mengnan Chai, Youmei Huang, Jingang Qi, Wenhui Zhu, Xinpeng Xi, Fangqian Chen, Yuan Qin, Hanyang Cai
Published 2021