Metatranscriptomes Reveal That All Three Domains of Life Are Active but Are Dominated by Bacteria in the Fennoscandian Crystalline Granitic Continental Deep Biosphere

by Margarita Lopez-Fernandez, Domenico Simone, Xiaofen Wu, Lucile Soler, Emelie Nilsson, Karin Holmfeldt, Henrik Lantz, Stefan Bertilsson, Mark Dopson
Published 2018

Statistical Analysis of Community RNA Transcripts between Organic Carbon and Geogas-Fed Continental Deep Biosphere Groundwaters

by Margarita Lopez-Fernandez, Elias Broman, Domenico Simone, Stefan Bertilsson, Mark Dopson
Published 2019

Contrasting Pathways for Anaerobic Methane Oxidation in Gulf of Mexico Cold Seep Sediments

by Adrien Vigneron, Eric B. Alsop, Perrine Cruaud, Gwenaelle Philibert, Benjamin King, Leslie Baksmaty, David Lavallee, Bartholomeus P. Lomans, Emiley Eloe-Fadrosh, Nikos C. Kyrpides, Ian M. Head, Nicolas Tsesmetzis
Published 2019

Niche Partitioning between Coastal and Offshore Shelf Waters Results in Differential Expression of Alkane and Polycyclic Aromatic Hydrocarbon Catabolic Pathways

by Shawn M. Doyle, Genmei Lin, Maya Morales-McDevitt, Terry L. Wade, Antonietta Quigg, Jason B. Sylvan
Published 2020

Consumption of a Western-Style Diet Modulates the Response of the Murine Gut Microbiome to Ciprofloxacin

by Damien J. Cabral, Jenna I. Wurster, Benjamin J. Korry, Swathi Penumutchu, Peter Belenky
Published 2020

Structured RNA Contaminants in Bacterial Ribo-Seq

by Brayon J. Fremin, Ami S. Bhatt
Published 2020

Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations

by Taniya Roy Chowdhury, Joon-Yong Lee, Eric M. Bottos, Colin J. Brislawn, Richard Allen White, Lisa M. Bramer, Joseph Brown, Jeremy D. Zucker, Young-Mo Kim, Ari Jumpponen, Charles W. Rice, Sarah J. Fansler, Thomas O. Metz, Lee Ann McCue, Stephen J. Callister, Hyun-Seob Song, Janet K. Jansson
Published 2019

Metatranscriptomics Supports the Mechanism for Biocathode Electroautotrophy by “<italic toggle="yes">Candidatus</italic> Tenderia electrophaga”

by Brian J. Eddie, Zheng Wang, W. Judson Hervey, Dagmar H. Leary, Anthony P. Malanoski, Leonard M. Tender, Baochuan Lin, Sarah M. Strycharz-Glaven
Published 2017

Uncovering the Diversity and Activity of Methylotrophic Methanogens in Freshwater Wetland Soils

by Adrienne B. Narrowe, Mikayla A. Borton, David W. Hoyt, Garrett J. Smith, Rebecca A. Daly, Jordan C. Angle, Elizabeth K. Eder, Allison R. Wong, Richard A. Wolfe, Alexandra Pappas, Gil Bohrer, Christopher S. Miller, Kelly C. Wrighton
Published 2019

Sizing Up the Uncultured Microbial Majority

by Laura A. Hug
Published 2018

The Oral Mouse Microbiome Promotes Tumorigenesis in Oral Squamous Cell Carcinoma

by Philip Stashenko, Susan Yost, Yoonhee Choi, Theodora Danciu, Tsute Chen, Subbiah Yoganathan, Christine Kressirer, Montserrat Ruiz-Tourrella, Bikul Das, Alexis Kokaras, Jorge Frias-Lopez
Published 2019

Microbiota and Metatranscriptome Changes Accompanying the Onset of Gingivitis

by Emily M. Nowicki, Raghav Shroff, Jacqueline A. Singleton, Diane E. Renaud, Debra Wallace, Julie Drury, Jolene Zirnheld, Brock Colleti, Andrew D. Ellington, Richard J. Lamont, David A. Scott, Marvin Whiteley
Published 2018

Integrated Meta-omics Reveals a Fungus-Associated Bacteriome and Distinct Functional Pathways in <named-content content-type="genus-species">Clostridioides difficile</named-content...

by David B. Stewart, Justin R. Wright, Maria Fowler, Christopher J. McLimans, Vasily Tokarev, Isabella Amaniera, Owen Baker, Hoi-Tong Wong, Jeff Brabec, Rebecca Drucker, Regina Lamendella
Published 2019

Complementary Roles of Wood-Inhabiting Fungi and Bacteria Facilitate Deadwood Decomposition

by Vojtěch Tláskal, Vendula Brabcová, Tomáš Větrovský, Mayuko Jomura, Rubén López-Mondéjar, Lummy Maria Oliveira Monteiro, João Pedro Saraiva, Zander Rainier Human, Tomáš Cajthaml, Ulisses Nunes da Rocha, Petr Baldrian
Published 2021

Metaproteomics: Much More than Measuring Gene Expression in Microbial Communities

by Manuel Kleiner
Published 2019

Metatranscriptomics by <italic toggle="yes">In Situ</italic> RNA Stabilization Directly and Comprehensively Revealed Episymbiotic Microbial Communities of Deep-Sea Squat Lobsters

by Kaori Motoki, Tomo-o Watsuji, Yoshihiro Takaki, Ken Takai, Wataru Iwasaki
Published 2020

Extensive Thioautotrophic Gill Endosymbiont Diversity within a Single <italic toggle="yes">Ctena orbiculata</italic> (Bivalvia: Lucinidae) Population and Implications for Defining...

by Shen Jean Lim, Louie Alexander, Annette Summers Engel, Audrey T. Paterson, Laurie C. Anderson, Barbara J. Campbell
Published 2019

Complex Response of the Chlorarachniophyte <named-content content-type="genus-species">Bigelowiella natans</named-content> to Iron Availability

by Eva Kotabova, Ronald Malych, Juan José Pierella Karlusich, Elena Kazamia, Meri Eichner, Jan Mach, Emmanuel Lesuisse, Chris Bowler, Ondřej Prášil, Robert Sutak
Published 2021

The In-Feed Antibiotic Carbadox Induces Phage Gene Transcription in the Swine Gut Microbiome

by Timothy A. Johnson, Torey Looft, Andrew J. Severin, Darrell O. Bayles, Daniel J. Nasko, K. Eric Wommack, Adina Howe, Heather K. Allen
Published 2017

Members of the Genus <italic toggle="yes">Methylobacter</italic> Are Inferred To Account for the Majority of Aerobic Methane Oxidation in Oxic Soils from a Freshwater Wetland

by Garrett J. Smith, Jordan C. Angle, Lindsey M. Solden, Mikayla A. Borton, Timothy H. Morin, Rebecca A. Daly, Michael D. Johnston, Kay C. Stefanik, Richard Wolfe, Bohrer Gil, Kelly C. Wrighton
Published 2018