Mostrando 21 - 39 Resultados de 39 Para Buscar '"Pfam"', tiempo de consulta: 0.04s Limitar resultados
  1. 21
    Functional characterisation of the transcriptome from leaf tissue of the fluoroacetate-producing plant, Dichapetalum cymosum, in response to mechanical wounding
    “... assembly generated 77,845 transcripts. Using the SwissProt, TrEMBL, GO, eggNOG, KEGG, Pfam, EC...”
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  2. 22
    RNA sequencing and de novo assembly of Solanum trilobatum leaf transcriptome to identify putative transcripts for major metabolic pathways
    “... database, Gene Ontology, KEGG, Uniprot, Pfam, and plnTFDB. A total of 60,097 unigenes were annotated...”
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  3. 23
    Desiccation tolerance in bryophytes: The dehydration and rehydration transcriptomes in the desiccation-tolerant bryophyte Bryum argenteum
    “... which 404 TFs within 40 families were differentially expressed upon dehydration-rehydration. Pfam term...”
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  4. 24
    Familial Cancer Variant Prioritization Pipeline version 2 (FCVPPv2) applied to a papillary thyroid cancer family
    “... vertebrates in the peptidase_M14 domain (Pfam ID PF00246). The CPXM1 gene may be involved in adipogenesis...”
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  5. 25
    A bi-specific lectin from the mushroom Boletopsis grisea and its application in glycoanalytical workflows
    “... was an obvious member of fungal fruit body lectin family (Pfam PF07367), a highly conserved group of mushroom...”
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  6. 26
    Transcriptomics of the bed bug (Cimex lectularius).
    “... domains were among the top Pfam domains predicted for the C. lectularius sequences. An initial assessment...”
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  7. 27
    Sequencing and de novo assembly of the western tarnished plant bug (Lygus hesperus) transcriptome.
    “... and Genomes (KEGG) annotations, and potential Pfam domains were assigned to each transcript isoform. To gain...”
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  8. 28
    Main Pathways and Ion Channels Differentially Expressed in the Transcriptome of Male and Female Adult Angiostrongylus cantonensis using a Deep Sequencing Approach
    “... Encyclopedia of Genes and Genomes (KEGG), NCBI non-redundant protein sequences (NR), PFAM, STRING, and SWISS...”
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  9. 29
    A taxonomy of bacterial microcompartment loci constructed by a novel scoring method.
    “... and inventories, weights, and compares their constituent pfam domains to construct a locus similarity network...”
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  10. 30
    De novo assembly of the perennial ryegrass transcriptome using an RNA-Seq strategy.
    “... transcripts with a BLASTp hit from the Swiss-Prot non-redundant database, 58,941 transcripts with a Pfam...”
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  11. 31
    The Dark mAtteR iNvestigator (DARN) tool: getting to know the known unknowns in COI amplicon data
    “...% of the initial number of reference sequences respectively) were retrieved from the BOLD and the PFam databases...”
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  12. 32
    Hybrid de novo genome-reassembly reveals new insights on pathways and pathogenicity determinants in rice blast pathogen Magnaporthe oryzae RMg_Dl
    “... protein sequences revealed that 97% protein family (PFAM), 98% superfamily, and 95% CDD were shared among...”
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  13. 33
    Networks of high mutual information define the structural proximity of catalytic sites: implications for catalytic residue identification.
    “...-functional conserved residues. Using a data set of 434 Pfam families included in the catalytic site atlas...”
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  14. 34
    Ecogenomic perspectives on domains of unknown function: correlation-based exploration of marine metagenomes.
    “... investigation.<h4>Methodology/principal findings</h4>We calculated the correlation of Pfam protein domain...”
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  15. 35
    Evaluation of drought resistance and transcriptome analysis for the identification of drought-responsive genes in Iris germanica
    “..., Nt, Pfam, KOG/COG, Swiss-Prot, KEGG, and gene ontology (GO) databases for functional annotation...”
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  16. 36
    A Reference Viral Database (RVDB) To Enhance Bioinformatics Analysis of High-Throughput Sequencing for Novel Virus Detection
    “... sequences (creps) was confirmed by BLAST searches in NCBI databases and HMMER searches in PFAM and DFAM...”
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  17. 37
    Composition of Flavonoids in the Petals of Freesia and Prediction of Four Novel Transcription Factors Involving in Freesia Flavonoid Pathway
    por Jiayi Zhu, Xueying Guo, Xin Li, Dongqin Tang
    Publicado 2021
    “... with gene ontology (GO), KEGG, and Pfam databases, it was found that the genes involved in the flavonoid...”
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  18. 38
    Cause and Effectors: Whole-Genome Comparisons Reveal Shared but Rapidly Evolving Effector Sets among Host-Specific Plant-Castrating Fungi
    “... family expansion or reduction. Between 52% and 68% of the SPs did not match any Pfam domain, a percentage...”
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  19. 39
    Genome-enabled phylogenetic and functional reconstruction of an araphid pennate diatom Plagiostriata sp. CCMP470, previously assigned as a radial centric diatom, and its bacterial commensal
    “... of CCMP470, which is the first genome available for a staurosiroid lineage. 270 Pfams (19%) found...”
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