Nonadditive Transcriptomic Signatures of Genotype-by-Genotype Interactions during the Initiation of Plant-Rhizobium Symbiosis

por Camilla Fagorzi, Giovanni Bacci, Rui Huang, Lisa Cangioli, Alice Checcucci, Margherita Fini, Elena Perrin, Chiara Natali, George Colin diCenzo, Alessio Mengoni
Publicado 2021

A 16S rRNA Gene and Draft Genome Database for the Murine Oral Bacterial Community

por Susan Joseph, Joseph Aduse-Opoku, Ahmed Hashim, Eveliina Hanski, Ricarda Streich, Sarah C. L. Knowles, Amy B. Pedersen, William G. Wade, Michael A. Curtis
Publicado 2021

Chaperone-Mediated Stress Sensing in <named-content content-type="genus-species">Mycobacterium tuberculosis</named-content> Enables Fast Activation and Sustained Response

por Satyajit D. Rao, Pratik Datta, Maria Laura Gennaro, Oleg A. Igoshin
Publicado 2021

Indoor Dust as a Matrix for Surveillance of COVID-19

por Nicole Renninger, Nicholas Nastasi, Ashleigh Bope, Samuel J. Cochran, Sarah R. Haines, Neeraja Balasubrahmaniam, Katelyn Stuart, Aaron Bivins, Kyle Bibby, Natalie M. Hull, Karen C. Dannemiller
Publicado 2021

Gradient Internal Standard Method for Absolute Quantification of Microbial Amplicon Sequencing Data

por Shilei Wang, Qun Wu, Ying Han, Rubing Du, Xiaoyong Wang, Yao Nie, Xiaowei Du, Yan Xu
Publicado 2021

Two-Target Quantitative PCR To Predict Library Composition for Shallow Shotgun Sequencing

por Matthew Y. Cho, Marc Oliva, Anna Spreafico, Bo Chen, Xu Wei, Yoojin Choi, Rupert Kaul, Lillian L. Siu, Bryan Coburn, Pierre H. H. Schneeberger
Publicado 2021

Identification and Quantification of Bovine Digital Dermatitis-Associated Microbiota across Lesion Stages in Feedlot Beef Cattle

por Ben Caddey, Karin Orsel, Sohail Naushad, Hooman Derakhshani, Jeroen De Buck
Publicado 2021

Genomic and Chemical Diversity of <named-content content-type="genus-species">Bacillus subtilis</named-content> Secondary Metabolites against Plant Pathogenic Fungi

por Heiko T. Kiesewalter, Carlos N. Lozano-Andrade, Mario Wibowo, Mikael L. Strube, Gergely Maróti, Dan Snyder, Tue Sparholt Jørgensen, Thomas O. Larsen, Vaughn S. Cooper, Tilmann Weber, Ákos T. Kovács
Publicado 2021

Comprehensive Large-Scale Integrative Analysis of Omics Data To Accelerate Specialized Metabolite Discovery

por Joris J. R. Louwen, Justin J. J. van der Hooft
Publicado 2021

Antibiotics Shift the Temperature Response Curve of Escherichia coli Growth

por Mauricio Cruz-Loya, Elif Tekin, Tina Manzhu Kang, Natalya Cardona, Natalie Lozano-Huntelman, Alejandra Rodriguez-Verdugo, Van M. Savage, Pamela J. Yeh
Publicado 2021

Harnessing Machine Learning To Unravel Protein Degradation in <named-content content-type="genus-species">Escherichia coli</named-content>

por Natan Nagar, Noa Ecker, Gil Loewenthal, Oren Avram, Daniella Ben-Meir, Dvora Biran, Eliora Ron, Tal Pupko
Publicado 2021

Comparative Genomic Analysis of <italic toggle="yes">Mycobacteriaceae</italic> Reveals Horizontal Gene Transfer-Mediated Evolution of the CRISPR-Cas System in the <named-content co...

por Anoop Singh, Mohita Gaur, Vishal Sharma, Palak Khanna, Ankur Bothra, Asani Bhaduri, Anupam Kumar Mondal, Debasis Dash, Yogendra Singh, Richa Misra
Publicado 2021

Modeling Growth Kinetics, Interspecies Cell Fusion, and Metabolism of a <named-content content-type="genus-species">Clostridium acetobutylicum</named-content>/<named-content conten...

por Charles Foster, Kamil Charubin, Eleftherios T. Papoutsakis, Costas D. Maranas
Publicado 2021

Transcription Inhibitors with XRE DNA-Binding and Cupin Signal-Sensing Domains Drive Metabolic Diversification in <italic toggle="yes">Pseudomonas</italic>

por Julian Trouillon, Michel Ragno, Victor Simon, Ina Attrée, Sylvie Elsen
Publicado 2021

Multi-omic Characterization of Intraspecies Variation in Laboratory and Natural Environments

por Megan G. Behringer
Publicado 2021

Catching SARS-CoV-2 by Sequence Hybridization: a Comparative Analysis

por Alexandra Rehn, Peter Braun, Mandy Knüpfer, Roman Wölfel, Markus H. Antwerpen, Mathias C. Walter
Publicado 2021

Air versus Water Chilling of Chicken: a Pilot Study of Quality, Shelf-Life, Microbial Ecology, and Economics

por Aeriel D. Belk, Toni Duarte, Casey Quinn, David A. Coil, Keith E. Belk, Jonathan A. Eisen, Jason C. Quinn, Jennifer N. Martin, Xiang Yang, Jessica L. Metcalf
Publicado 2021

Lineage-Specific Rewiring of Core Pathways Predating Innovation of Legume Nodules Shapes Symbiotic Efficiency

por Wen-Jing Cui, Biliang Zhang, Ran Zhao, Li-Xue Liu, Jian Jiao, Ziding Zhang, Chang-Fu Tian
Publicado 2021

Integrative Transkingdom Analysis of the Gut Microbiome in Antibiotic Perturbation and Critical Illness

por Bastiaan W. Haak, Ricard Argelaguet, Cormac M. Kinsella, Robert F. J. Kullberg, Jacqueline M. Lankelma, Martin Deijs, Michelle Klein, Maarten F. Jebbink, Floor Hugenholtz, Sarantos Kostidis, Martin Giera, Theodorus B. M. Hakvoort, Wouter J. de Jonge, Marcus J. Schultz, Tom van Gool, Tom van der Poll, Willem M. de Vos, Lia M. van der Hoek, W. Joost Wiersinga
Publicado 2021

<named-content content-type="genus-species">Dinoroseobacter shibae</named-content> Outer Membrane Vesicles Are Enriched for the Chromosome Dimer Resolution Site <italic toggle="yes...

por Hui Wang, Nicole Beier, Christian Boedeker, Helena Sztajer, Petra Henke, Meina Neumann-Schaal, Johannes Mansky, Manfred Rohde, Jörg Overmann, Jörn Petersen, Frank Klawonn, Martin Kucklick, Susanne Engelmann, Jürgen Tomasch, Irene Wagner-Döbler
Publicado 2021