Breast cancer genome and transcriptome integration implicates specific mutational signatures with immune cell infiltration

por Marcel Smid, F. Germán Rodríguez-González, Anieta M. Sieuwerts, Roberto Salgado, Wendy J. C. Prager-Van der Smissen, Michelle van der Vlugt-Daane, Anne van Galen, Serena Nik-Zainal, Johan Staaf, Arie B. Brinkman, Marc J. van de Vijver, Andrea L. Richardson, Aquila Fatima, Kim Berentsen, Adam Butler, Sancha Martin, Helen R. Davies, Reno Debets, Marion E. Meijer-Van Gelder, Carolien H. M. van Deurzen, Gaëtan MacGrogan, Gert G. G. M. Van den Eynden, Colin Purdie, Alastair M. Thompson, Carlos Caldas, Paul N. Span, Peter T. Simpson, Sunil R. Lakhani, Steven Van Laere, Christine Desmedt, Markus Ringnér, Stefania Tommasi, Jorunn Eyford, Annegien Broeks, Anne Vincent-Salomon, P. Andrew Futreal, Stian Knappskog, Tari King, Gilles Thomas, Alain Viari, Anita Langerød, Anne-Lise Børresen-Dale, Ewan Birney, Hendrik G. Stunnenberg, Mike Stratton, John A. Foekens, John W. M. Martens
Publicado 2016

A conserved influenza A virus nucleoprotein code controls specific viral genome packaging

por Étori Aguiar Moreira, Anna Weber, Hardin Bolte, Larissa Kolesnikova, Sebastian Giese, Seema Lakdawala, Martin Beer, Gert Zimmer, Adolfo García-Sastre, Martin Schwemmle, Mindaugas Juozapaitis
Publicado 2016

Analysis of 427 genomes reveals moso bamboo population structure and genetic basis of property traits

por Hansheng Zhao, Shuai Sun, Yulong Ding, Yue Wang, Xianghua Yue, Xiao Du, Qiang Wei, Guangyi Fan, Huayu Sun, Yongfeng Lou, Huanming Yang, Jian Wang, Xun Xu, Lichao Li, Kebin Yang, Hao Xu, Jiongliang Wang, Chenglei Zhu, Sining Wang, Xuemeng Shan, Yinguang Hou, Yu Wang, Benhua Fei, Xin Liu, Zehui Jiang, Zhimin Gao
Publicado 2021

Orthogonal Cas9–Cas9 chimeras provide a versatile platform for genome editing

por Mehmet Fatih Bolukbasi, Pengpeng Liu, Kevin Luk, Samantha F. Kwok, Ankit Gupta, Nadia Amrani, Erik J. Sontheimer, Lihua Julie Zhu, Scot A. Wolfe
Publicado 2018

Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans

por Yoann Seeleuthner, Samuel Mondy, Vincent Lombard, Quentin Carradec, Eric Pelletier, Marc Wessner, Jade Leconte, Jean-François Mangot, Julie Poulain, Karine Labadie, Ramiro Logares, Shinichi Sunagawa, Véronique de Berardinis, Marcel Salanoubat, Céline Dimier, Stefanie Kandels-Lewis, Marc Picheral, Sarah Searson, Tara Oceans Coordinators, Stephane Pesant, Nicole Poulton, Ramunas Stepanauskas, Peer Bork, Chris Bowler, Pascal Hingamp, Matthew B. Sullivan, Daniele Iudicone, Ramon Massana, Jean-Marc Aury, Bernard Henrissat, Eric Karsenti, Olivier Jaillon, Mike Sieracki, Colomban de Vargas, Patrick Wincker
Publicado 2018

A human genome-wide loss-of-function screen identifies effective chikungunya antiviral drugs

por Alexander Karlas, Stefano Berre, Thérèse Couderc, Margus Varjak, Peter Braun, Michael Meyer, Nicolas Gangneux, Liis Karo-Astover, Friderike Weege, Martin Raftery, Günther Schönrich, Uwe Klemm, Anne Wurzlbauer, Franz Bracher, Andres Merits, Thomas F. Meyer, Marc Lecuit
Publicado 2016

Deep coverage whole genome sequences and plasma lipoprotein(a) in individuals of European and African ancestries

por Seyedeh M. Zekavat, Sanni Ruotsalainen, Robert E. Handsaker, Maris Alver, Jonathan Bloom, Timothy Poterba, Cotton Seed, Jason Ernst, Mark Chaffin, Jesse Engreitz, Gina M. Peloso, Ani Manichaikul, Chaojie Yang, Kathleen A. Ryan, Mao Fu, W. Craig Johnson, Michael Tsai, Matthew Budoff, Ramachandran S. Vasan, L. Adrienne Cupples, Jerome I. Rotter, Stephen S. Rich, Wendy Post, Braxton D. Mitchell, Adolfo Correa, Andres Metspalu, James G. Wilson, Veikko Salomaa, Manolis Kellis, Mark J. Daly, Benjamin M. Neale, Steven McCarroll, Ida Surakka, Tonu Esko, Andrea Ganna, Samuli Ripatti, Sekar Kathiresan, Pradeep Natarajan, NHLBI TOPMed Lipids Working Group
Publicado 2018

Cryptic glucocorticoid receptor-binding sites pervade genomic NF-κB response elements

por William H. Hudson, Ian Mitchelle S. de Vera, Jerome C. Nwachukwu, Emily R. Weikum, Austin G. Herbst, Qin Yang, David L. Bain, Kendall W. Nettles, Douglas J. Kojetin, Eric A. Ortlund
Publicado 2018

Genome-wide sequencing-based identification of methylation quantitative trait loci and their role in schizophrenia risk

por Kira A. Perzel Mandell, Nicholas J. Eagles, Richard Wilton, Amanda J. Price, Stephen A. Semick, Leonardo Collado-Torres, William S. Ulrich, Ran Tao, Shizhong Han, Alexander S. Szalay, Thomas M. Hyde, Joel E. Kleinman, Daniel R. Weinberger, Andrew E. Jaffe
Publicado 2021

Convergent evolution of a genomic rearrangement may explain cancer resistance in hystrico- and sciuromorpha rodents

por Yachna Jain, Keerthivasan Raanin Chandradoss, Anjoom A. V., Jui Bhattacharya, Mohan Lal, Meenakshi Bagadia, Harpreet Singh, Kuljeet Singh Sandhu
Publicado 2021

Analysis of the Genome Sequence of Strain GiC-126 of Gloeostereum incarnatum with Genetic Linkage Map

por Wan-Zhu Jiang, Fang-Jie Yao, Ming Fang, Li-Xin Lu, You-Min Zhang, Peng Wang, Jing-Jing Meng, Jia Lu, Xiao-Xu Ma, Qi He, Kai-Sheng Shao, Asif Ali Khan, Yun-Hui Wei
Publicado 2021

Genome-Wide Identification, Transcript Profiling and Bioinformatic Analyses of GRAS Transcription Factor Genes in Rice

por Mouboni Dutta, Anusree Saha, Mazahar Moin, Pulugurtha Bharadwaja Kirti, Pulugurtha Bharadwaja Kirti
Publicado 2021

High-efficiency CRISPR gene editing in C. elegans using Cas9 integrated into the genome

por Matthew L. Schwartz, M. Wayne Davis, Matthew S. Rich, Erik M. Jorgensen
Publicado 2021

Genetic Pathways and Functional Subnetworks for the Complex Nature of Bipolar Disorder in Genome-Wide Association Study

por Chan-Yen Kuo, Chan-Yen Kuo, Tsu-Yi Chen, Tsu-Yi Chen, Pei-Hsiu Kao, Winifred Huang, Chun-Ruei Cho, Ya-Syuan Lai, Giou-Teng Yiang, Giou-Teng Yiang, Chung-Feng Kao, Chung-Feng Kao
Publicado 2021

Preparation and Antimicrobial Activity Analysis of Organic Soap Bar Containing Gnetum gnemon Peel Extract

por Sri Handayani, Indyah Sulistyo Arty, Cornelia Budimarwanti, Karim Theresih, Evy Yulianti, Melati Khairuddean
Publicado 2021

Whole genome sequencing and in vitro splice assays reveal genetic causes for inherited retinal diseases

por Zeinab Fadaie, Laura Whelan, Tamar Ben-Yosef, Adrian Dockery, Zelia Corradi, Christian Gilissen, Lonneke Haer-Wigman, Jordi Corominas, Galuh D. N. Astuti, Laura de Rooij, L. Ingeborgh van den Born, Caroline C. W. Klaver, Carel B. Hoyng, Niamh Wynne, Emma S. Duignan, Paul F. Kenna, Frans P. M. Cremers, G. Jane Farrar, Susanne Roosing
Publicado 2021

Genome-wide CRISPR-Cas9 screens identify mechanisms of BET bromodomain inhibitor sensitivity

por David Estoppey, Gabi Schutzius, Christian Kolter, Adrian Salathe, Tiffany Wunderlin, Amandine Meyer, Florian Nigsch, Tewis Bouwmeester, Dominic Hoepfner, Susan Kirkland
Publicado 2021

Presence of extensive Wolbachia symbiont insertions discovered in the genome of its host Glossina morsitans morsitans.

por Corey Brelsfoard, George Tsiamis, Marco Falchetto, Ludvik M Gomulski, Erich Telleria, Uzma Alam, Vangelis Doudoumis, Francesca Scolari, Joshua B Benoit, Martin Swain, Peter Takac, Anna R Malacrida, Kostas Bourtzis, Serap Aksoy
Publicado 2014

Microsatellites from sponge genomes: the number necessary for detecting genetic structure in Hemimycale columella populations

por J González-Ramos, G Agell, MJ Uriz
Publicado 2015

Regulators of global genome repair do not respond to DNA damaging therapy but correlate with survival in melanoma.

por Nikola A Bowden, Katie A Ashton, Ricardo E Vilain, Kelly A Avery-Kiejda, Ryan J Davey, Heather C Murray, Timothy Budden, Stephen G Braye, Xu Dong Zhang, Peter Hersey, Rodney J Scott
Publicado 2013