Multi-omic tumor data reveal diversity of molecular mechanisms that correlate with survival

by Daniele Ramazzotti, Avantika Lal, Bo Wang, Serafim Batzoglou, Arend Sidow
Published 2018

De novo mutational signature discovery in tumor genomes using SparseSignatures.

by Avantika Lal, Keli Liu, Robert Tibshirani, Arend Sidow, Daniele Ramazzotti
Published 2021

Aquila enables reference-assisted diploid personal genome assembly and comprehensive variant detection based on linked reads

by Xin Zhou, Lu Zhang, Ziming Weng, David L. Dill, Arend Sidow
Published 2021

SHRiMP: accurate mapping of short color-space reads.

by Stephen M Rumble, Phil Lacroute, Adrian V Dalca, Marc Fiume, Arend Sidow, Michael Brudno
Published 2009

Identifying a high fraction of the human genome to be under selective constraint using GERP++.

by Eugene V Davydov, David L Goode, Marina Sirota, Gregory M Cooper, Arend Sidow, Serafim Batzoglou
Published 2010