Whole genome complete resequencing of Bacillus subtilis natto by combining long reads with high-quality short reads.

por Mayumi Kamada, Sumitaka Hase, Kengo Sato, Atsushi Toyoda, Asao Fujiyama, Yasubumi Sakakibara
Publicado 2014

Metaepigenomic analysis reveals the unexplored diversity of DNA methylation in an environmental prokaryotic community

por Satoshi Hiraoka, Yusuke Okazaki, Mizue Anda, Atsushi Toyoda, Shin-ichi Nakano, Wataru Iwasaki
Publicado 2019

Reduction in chromosome mobility accompanies nuclear organization during early embryogenesis in Caenorhabditis elegans

por Ritsuko Arai, Takeshi Sugawara, Yuko Sato, Yohei Minakuchi, Atsushi Toyoda, Kentaro Nabeshima, Hiroshi Kimura, Akatsuki Kimura
Publicado 2017

Genome features of "Dark-fly", a Drosophila line reared long-term in a dark environment.

por Minako Izutsu, Jun Zhou, Yuzo Sugiyama, Osamu Nishimura, Tomoyuki Aizu, Atsushi Toyoda, Asao Fujiyama, Kiyokazu Agata, Naoyuki Fuse
Publicado 2012

Genomics and transcriptomics of the green mussel explain the durability of its byssus

por Koji Inoue, Yuki Yoshioka, Hiroyuki Tanaka, Azusa Kinjo, Mieko Sassa, Ikuo Ueda, Chuya Shinzato, Atsushi Toyoda, Takehiko Itoh
Publicado 2021

Identification of an imprinted gene cluster in the X-inactivation center.

por Shin Kobayashi, Yasushi Totoki, Miki Soma, Kazuya Matsumoto, Yoshitaka Fujihara, Atsushi Toyoda, Yoshiyuki Sakaki, Masaru Okabe, Fumitoshi Ishino
Publicado 2013

Platanus-allee is a de novo haplotype assembler enabling a comprehensive access to divergent heterozygous regions

por Rei Kajitani, Dai Yoshimura, Miki Okuno, Yohei Minakuchi, Hiroshi Kagoshima, Asao Fujiyama, Kaoru Kubokawa, Yuji Kohara, Atsushi Toyoda, Takehiko Itoh
Publicado 2019

Evolution of sequence-specific anti-silencing systems in Arabidopsis

por Aoi Hosaka, Raku Saito, Kazuya Takashima, Taku Sasaki, Yu Fu, Akira Kawabe, Tasuku Ito, Atsushi Toyoda, Asao Fujiyama, Yoshiaki Tarutani, Tetsuji Kakutani
Publicado 2017

Genome sequencing of the multicellular alga Astrephomene provides insights into convergent evolution of germ-soma differentiation

por Shota Yamashita, Kayoko Yamamoto, Ryo Matsuzaki, Shigekatsu Suzuki, Haruyo Yamaguchi, Shunsuke Hirooka, Yohei Minakuchi, Shin-ya Miyagishima, Masanobu Kawachi, Atsushi Toyoda, Hisayoshi Nozaki
Publicado 2021

Analysis of DNA repair and protection in the Tardigrade Ramazzottius varieornatus and Hypsibius dujardini after exposure to UVC radiation.

por Daiki D Horikawa, John Cumbers, Iori Sakakibara, Dana Rogoff, Stefan Leuko, Raechel Harnoto, Kazuharu Arakawa, Toshiaki Katayama, Takekazu Kunieda, Atsushi Toyoda, Asao Fujiyama, Lynn J Rothschild
Publicado 2013

Two novel heat-soluble protein families abundantly expressed in an anhydrobiotic tardigrade.

por Ayami Yamaguchi, Sae Tanaka, Shiho Yamaguchi, Hirokazu Kuwahara, Chizuko Takamura, Shinobu Imajoh-Ohmi, Daiki D Horikawa, Atsushi Toyoda, Toshiaki Katayama, Kazuharu Arakawa, Asao Fujiyama, Takeo Kubo, Takekazu Kunieda
Publicado 2012

Genome editing reveals fitness effects of a gene for sexual dichromatism in Sulawesian fishes

por Satoshi Ansai, Koji Mochida, Shingo Fujimoto, Daniel F. Mokodongan, Bayu Kreshna Adhitya Sumarto, Kawilarang W. A. Masengi, Renny K. Hadiaty, Atsushi J. Nagano, Atsushi Toyoda, Kiyoshi Naruse, Kazunori Yamahira, Jun Kitano
Publicado 2021

Genome of the fatal tapeworm Sparganum proliferum uncovers mechanisms for cryptic life cycle and aberrant larval proliferation

por Taisei Kikuchi, Mehmet Dayi, Vicky L. Hunt, Kenji Ishiwata, Atsushi Toyoda, Asuka Kounosu, Simo Sun, Yasunobu Maeda, Yoko Kondo, Belkisyole Alarcon de Noya, Oscar Noya, Somei Kojima, Toshiaki Kuramochi, Haruhiko Maruyama
Publicado 2021

Insights into the genomic evolution of insects from cricket genomes

por Guillem Ylla, Taro Nakamura, Takehiko Itoh, Rei Kajitani, Atsushi Toyoda, Sayuri Tomonari, Tetsuya Bando, Yoshiyasu Ishimaru, Takahito Watanabe, Masao Fuketa, Yuji Matsuoka, Austen A. Barnett, Sumihare Noji, Taro Mito, Cassandra G. Extavour
Publicado 2021

Acetylation of histone H4 lysine 5 and 12 is required for CENP-A deposition into centromeres

por Wei-Hao Shang, Tetsuya Hori, Frederick G. Westhorpe, Kristina M. Godek, Atsushi Toyoda, Sadahiko Misu, Norikazu Monma, Kazuho Ikeo, Christopher W. Carroll, Yasunari Takami, Asao Fujiyama, Hiroshi Kimura, Aaron F. Straight, Tatsuo Fukagawa
Publicado 2016

Comparison of Genomic and Epigenomic Expression in Monozygotic Twins Discordant for Rett Syndrome.

por Kunio Miyake, Chunshu Yang, Yohei Minakuchi, Kenta Ohori, Masaki Soutome, Takae Hirasawa, Yasuhiro Kazuki, Noboru Adachi, Seiko Suzuki, Masayuki Itoh, Yu-Ichi Goto, Tomoko Andoh, Hiroshi Kurosawa, Mitsuo Oshimura, Masayuki Sasaki, Atsushi Toyoda, Takeo Kubota
Publicado 2013

A chromosome-level genome sequence of Chrysanthemum seticuspe, a model species for hexaploid cultivated chrysanthemum

por Michiharu Nakano, Hideki Hirakawa, Eigo Fukai, Atsushi Toyoda, Rei Kajitani, Yohei Minakuchi, Takehiko Itoh, Yohei Higuchi, Toshiaki Kozuka, Hidemasa Bono, Kenta Shirasawa, Ippei Shiraiwa, Katsuhiko Sumitomo, Tamotsu Hisamatsu, Michio Shibata, Sachiko Isobe, Kenji Taniguchi, Makoto Kusaba
Publicado 2021

Genome-wide association study and genomic prediction in citrus: Potential of genomics-assisted breeding for fruit quality traits

por Mai F. Minamikawa, Keisuke Nonaka, Eli Kaminuma, Hiromi Kajiya-Kanegae, Akio Onogi, Shingo Goto, Terutaka Yoshioka, Atsushi Imai, Hiroko Hamada, Takeshi Hayashi, Satomi Matsumoto, Yuichi Katayose, Atsushi Toyoda, Asao Fujiyama, Yasukazu Nakamura, Tokurou Shimizu, Hiroyoshi Iwata
Publicado 2017

Chromosome-level genome assembly of Ophiorrhiza pumila reveals the evolution of camptothecin biosynthesis

por Amit Rai, Hideki Hirakawa, Ryo Nakabayashi, Shinji Kikuchi, Koki Hayashi, Megha Rai, Hiroshi Tsugawa, Taiki Nakaya, Tetsuya Mori, Hideki Nagasaki, Runa Fukushi, Yoko Kusuya, Hiroki Takahashi, Hiroshi Uchiyama, Atsushi Toyoda, Shoko Hikosaka, Eiji Goto, Kazuki Saito, Mami Yamazaki
Publicado 2021

Repeated inversions within a pannier intron drive diversification of intraspecific colour patterns of ladybird beetles

por Toshiya Ando, Takeshi Matsuda, Kumiko Goto, Kimiko Hara, Akinori Ito, Junya Hirata, Joichiro Yatomi, Rei Kajitani, Miki Okuno, Katsushi Yamaguchi, Masaaki Kobayashi, Tomoyuki Takano, Yohei Minakuchi, Masahide Seki, Yutaka Suzuki, Kentaro Yano, Takehiko Itoh, Shuji Shigenobu, Atsushi Toyoda, Teruyuki Niimi
Publicado 2018