RNA secondary structure prediction using deep learning with thermodynamic integration

por Kengo Sato, Manato Akiyama, Yasubumi Sakakibara
Publicado 2021

A Max-Margin Model for Predicting Residue—Base Contacts in Protein–RNA Interactions

por Shunya Kashiwagi, Kengo Sato, Yasubumi Sakakibara
Publicado 2021

Whole genome complete resequencing of Bacillus subtilis natto by combining long reads with high-quality short reads.

por Mayumi Kamada, Sumitaka Hase, Kengo Sato, Atsushi Toyoda, Asao Fujiyama, Yasubumi Sakakibara
Publicado 2014

Chromosomal-scale de novo genome assemblies of Cynomolgus Macaque and Common Marmoset

por Vasanthan Jayakumar, Osamu Nishimura, Mitsutaka Kadota, Naoki Hirose, Hiromi Sano, Yasuhiro Murakawa, Yumiko Yamamoto, Masataka Nakaya, Tomoyuki Tsukiyama, Yasunari Seita, Shinichiro Nakamura, Jun Kawai, Erika Sasaki, Masatsugu Ema, Shigehiro Kuraku, Hideya Kawaji, Yasubumi Sakakibara
Publicado 2021

Genome sequence and analysis of the Japanese morning glory Ipomoea nil

por Atsushi Hoshino, Vasanthan Jayakumar, Eiji Nitasaka, Atsushi Toyoda, Hideki Noguchi, Takehiko Itoh, Tadasu Shin-I, Yohei Minakuchi, Yuki Koda, Atsushi J. Nagano, Masaki Yasugi, Mie N. Honjo, Hiroshi Kudoh, Motoaki Seki, Asako Kamiya, Toshiyuki Shiraki, Piero Carninci, Erika Asamizu, Hiroyo Nishide, Sachiko Tanaka, Kyeung-Il Park, Yasumasa Morita, Kohei Yokoyama, Ikuo Uchiyama, Yoshikazu Tanaka, Satoshi Tabata, Kazuo Shinozaki, Yoshihide Hayashizaki, Yuji Kohara, Yutaka Suzuki, Sumio Sugano, Asao Fujiyama, Shigeru Iida, Yasubumi Sakakibara
Publicado 2016