Transcription factor Amr1 induces melanin biosynthesis and suppresses virulence in Alternaria brassicicola.

por Yangrae Cho, Akhil Srivastava, Robin A Ohm, Christopher B Lawrence, Koon-Hui Wang, Igor V Grigoriev, Sharadchandra P Marahatta
Publicado 2012

Heterospecific Neighbor Plants Impact Root Microbiome Diversity and Molecular Function of Root Fungi

por Hui-Ling Liao, Hui-Ling Liao, Gregory Bonito, Khalid Hameed, Steven H. Wu, Ko-Hsuan Chen, Ko-Hsuan Chen, Jesse Labbé, Jesse Labbé, Christopher W. Schadt, Gerald A. Tuskan, Francis Martin, Alan Kuo, Kerrie Barry, Igor V. Grigoriev, Igor V. Grigoriev, Rytas Vilgalys
Publicado 2021

Genome-scale phylogenetic analyses confirm Olpidium as the closest living zoosporic fungus to the non-flagellated, terrestrial fungi

por Ying Chang, D’Ann Rochon, Satoshi Sekimoto, Yan Wang, Mansi Chovatia, Laura Sandor, Asaf Salamov, Igor V. Grigoriev, Jason E. Stajich, Joseph W. Spatafora
Publicado 2021

Bacterial endosymbionts influence host sexuality and reveal reproductive genes of early divergent fungi

por Stephen J. Mondo, Olga A. Lastovetsky, Maria L. Gaspar, Nicole H. Schwardt, Colin C. Barber, Robert Riley, Hui Sun, Igor V. Grigoriev, Teresa E. Pawlowska
Publicado 2017

Revisiting a ‘simple’ fungal metabolic pathway reveals redundancy, complexity and diversity

por Tania Chroumpi, Mao Peng, Maria Victoria Aguilar‐Pontes, Astrid Müller, Mei Wang, Juying Yan, Anna Lipzen, Vivian Ng, Igor V. Grigoriev, Miia R. Mäkelä, Ronald P. deVries
Publicado 2021

Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast <italic toggle="yes">Trichosporon oleaginosus</italic>: Insights into Substrate Utilization and Al...

por Robert Kourist, Felix Bracharz, Jan Lorenzen, Octavia N. Kracht, Mansi Chovatia, Chris Daum, Shweta Deshpande, Anna Lipzen, Matt Nolan, Robin A. Ohm, Igor V. Grigoriev, Sheng Sun, Joseph Heitman, Thomas Brück, Minou Nowrousian
Publicado 2015

Omics analyses and biochemical study of Phlebiopsis gigantea elucidate its degradation strategy of wood extractives

por Mana Iwata, Ana Gutiérrez, Gisela Marques, Grzegorz Sabat, Philip J. Kersten, Daniel Cullen, Jennifer M. Bhatnagar, Jagjit Yadav, Anna Lipzen, Yuko Yoshinaga, Aditi Sharma, Catherine Adam, Christopher Daum, Vivian Ng, Igor V. Grigoriev, Chiaki Hori
Publicado 2021

Evolutionary instability of CUG-Leu in the genetic code of budding yeasts

por Tadeusz Krassowski, Aisling Y. Coughlan, Xing-Xing Shen, Xiaofan Zhou, Jacek Kominek, Dana A. Opulente, Robert Riley, Igor V. Grigoriev, Nikunj Maheshwari, Denis C. Shields, Cletus P. Kurtzman, Chris Todd Hittinger, Antonis Rokas, Kenneth H. Wolfe
Publicado 2018

Regulation of Yeast-to-Hyphae Transition in <named-content content-type="genus-species">Yarrowia lipolytica</named-content>

por Kyle R. Pomraning, Erin L. Bredeweg, Eduard J. Kerkhoven, Kerrie Barry, Sajeet Haridas, Hope Hundley, Kurt LaButti, Anna Lipzen, Mi Yan, Jon K. Magnuson, Blake A. Simmons, Igor V. Grigoriev, Jens Nielsen, Scott E. Baker
Publicado 2018

Cocultivation of Anaerobic Fungi with Rumen Bacteria Establishes an Antagonistic Relationship

por Candice L. Swift, Katherine B. Louie, Benjamin P. Bowen, Casey A. Hooker, Kevin V. Solomon, Vasanth Singan, Chris Daum, Christa P. Pennacchio, Kerrie Barry, Vaithiyalingam Shutthanandan, James E. Evans, Igor V. Grigoriev, Trent R. Northen, Michelle A. O’Malley
Publicado 2021

Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi

por Dániel G. Knapp, Julianna B. Németh, Kerrie Barry, Matthieu Hainaut, Bernard Henrissat, Jenifer Johnson, Alan Kuo, Joanne Hui Ping Lim, Anna Lipzen, Matt Nolan, Robin A. Ohm, László Tamás, Igor V. Grigoriev, Joseph W. Spatafora, László G. Nagy, Gábor M. Kovács
Publicado 2018

A multi-omic characterization of temperature stress in a halotolerant Scenedesmus strain for algal biotechnology

por Sara Calhoun, Tisza Ann Szeremy Bell, Lukas R. Dahlin, Yuliya Kunde, Kurt LaButti, Katherine B. Louie, Andrea Kuftin, Daniel Treen, David Dilworth, Sirma Mihaltcheva, Christopher Daum, Benjamin P. Bowen, Trent R. Northen, Michael T. Guarnieri, Shawn R. Starkenburg, Igor V. Grigoriev
Publicado 2021

Diploid genomic architecture of Nitzschia inconspicua, an elite biomass production diatom

por Aaron Oliver, Sheila Podell, Agnieszka Pinowska, Jesse C. Traller, Sarah R. Smith, Ryan McClure, Alex Beliaev, Pavlo Bohutskyi, Eric A. Hill, Ariel Rabines, Hong Zheng, Lisa Zeigler Allen, Alan Kuo, Igor V. Grigoriev, Andrew E. Allen, David Hazlebeck, Eric E. Allen
Publicado 2021

Experimentally Validated Reconstruction and Analysis of a Genome-Scale Metabolic Model of an Anaerobic Neocallimastigomycota Fungus

por St. Elmo Wilken, Jonathan M. Monk, Patrick A. Leggieri, Christopher E. Lawson, Thomas S. Lankiewicz, Susanna Seppälä, Chris G. Daum, Jerry Jenkins, Anna M. Lipzen, Stephen J. Mondo, Kerrie W. Barry, Igor V. Grigoriev, John K. Henske, Michael K. Theodorou, Bernhard O. Palsson, Linda R. Petzold, Michelle A. O’Malley
Publicado 2021

Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen Dothideomycetes fungi.

por Robin A Ohm, Nicolas Feau, Bernard Henrissat, Conrad L Schoch, Benjamin A Horwitz, Kerrie W Barry, Bradford J Condon, Alex C Copeland, Braham Dhillon, Fabian Glaser, Cedar N Hesse, Idit Kosti, Kurt LaButti, Erika A Lindquist, Susan Lucas, Asaf A Salamov, Rosie E Bradshaw, Lynda Ciuffetti, Richard C Hamelin, Gert H J Kema, Christopher Lawrence, James A Scott, Joseph W Spatafora, B Gillian Turgeon, Pierre J G M de Wit, Shaobin Zhong, Stephen B Goodwin, Igor V Grigoriev
Publicado 2012

Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum

por Martina Peter, Annegret Kohler, Robin A. Ohm, Alan Kuo, Jennifer Krützmann, Emmanuelle Morin, Matthias Arend, Kerrie W. Barry, Manfred Binder, Cindy Choi, Alicia Clum, Alex Copeland, Nadine Grisel, Sajeet Haridas, Tabea Kipfer, Kurt LaButti, Erika Lindquist, Anna Lipzen, Renaud Maire, Barbara Meier, Sirma Mihaltcheva, Virginie Molinier, Claude Murat, Stefanie Pöggeler, C. Alisha Quandt, Christoph Sperisen, Andrew Tritt, Emilie Tisserant, Pedro W. Crous, Bernard Henrissat, Uwe Nehls, Simon Egli, Joseph W. Spatafora, Igor V. Grigoriev, Francis M. Martin
Publicado 2016

The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole

por Kara Martin, Katrin Schmidt, Andrew Toseland, Chris A. Boulton, Kerrie Barry, Bánk Beszteri, Corina P. D. Brussaard, Alicia Clum, Chris G. Daum, Emiley Eloe-Fadrosh, Allison Fong, Brian Foster, Bryce Foster, Michael Ginzburg, Marcel Huntemann, Natalia N. Ivanova, Nikos C. Kyrpides, Erika Lindquist, Supratim Mukherjee, Krishnaveni Palaniappan, T. B. K. Reddy, Mariam R. Rizkallah, Simon Roux, Klaas Timmermans, Susannah G. Tringe, Willem H. van de Poll, Neha Varghese, Klaus U. Valentin, Timothy M. Lenton, Igor V. Grigoriev, Richard M. Leggett, Vincent Moulton, Thomas Mock
Publicado 2021

A comparative genomics study of 23 Aspergillus species from section Flavi

por Inge Kjærbølling, Tammi Vesth, Jens C. Frisvad, Jane L. Nybo, Sebastian Theobald, Sara Kildgaard, Thomas Isbrandt Petersen, Alan Kuo, Atsushi Sato, Ellen K. Lyhne, Martin E. Kogle, Ad Wiebenga, Roland S. Kun, Ronnie J. M. Lubbers, Miia R. Mäkelä, Kerrie Barry, Mansi Chovatia, Alicia Clum, Chris Daum, Sajeet Haridas, Guifen He, Kurt LaButti, Anna Lipzen, Stephen Mondo, Jasmyn Pangilinan, Robert Riley, Asaf Salamov, Blake A. Simmons, Jon K. Magnuson, Bernard Henrissat, Uffe H. Mortensen, Thomas O. Larsen, Ronald P. de Vries, Igor V. Grigoriev, Masayuki Machida, Scott E. Baker, Mikael R. Andersen
Publicado 2020