Contrasting Life Strategies of Viruses that Infect Photo- and Heterotrophic Bacteria, as Revealed by Viral Tagging

by Li Deng, Ann Gregory, Suzan Yilmaz, Bonnie T. Poulos, Philip Hugenholtz, Matthew B. Sullivan
Published 2012

Contrasting Life Strategies of Viruses That Infect Photo- and Heterotrophic Bacteria, as Revealed by Viral Tagging

by Li Deng, Ann Gregory, Suzan Yilmaz, Bonnie T. Poulos, Philip Hugenholtz, Matthew B. Sullivan
Published 2013

Spinal Cord Injury Changes the Structure and Functional Potential of Gut Bacterial and Viral Communities

by Jingjie Du, Ahmed A. Zayed, Kristina A. Kigerl, Kylie Zane, Matthew B. Sullivan, Phillip G. Popovich
Published 2021

Ecogenomics of virophages and their giant virus hosts assessed through time series metagenomics

by Simon Roux, Leong-Keat Chan, Rob Egan, Rex R. Malmstrom, Katherine D. McMahon, Matthew B. Sullivan
Published 2017

Friends or Foes? Rapid Determination of Dissimilar Colistin and Ciprofloxacin Antagonism of <i>Pseudomonas aeruginosa</i> Phages

by Katarzyna M. Danis-Wlodarczyk, Alice Cai, Anna Chen, Marissa R. Gittrich, Matthew B. Sullivan, Daniel J. Wozniak, Stephen T. Abedon
Published 2021

Numerous cultivated and uncultivated viruses encode ribosomal proteins

by Carolina M. Mizuno, Charlotte Guyomar, Simon Roux, Régis Lavigne, Francisco Rodriguez-Valera, Matthew B. Sullivan, Reynald Gillet, Patrick Forterre, Mart Krupovic
Published 2019

High-throughput identification of viral termini and packaging mechanisms in virome datasets using PhageTermVirome

by Julian R. Garneau, Véronique Legrand, Martial Marbouty, Maximilian O. Press, Dean R. Vik, Louis-Charles Fortier, Matthew B. Sullivan, David Bikard, Marc Monot
Published 2021

Ecology of inorganic sulfur auxiliary metabolism in widespread bacteriophages

by Kristopher Kieft, Zhichao Zhou, Rika E. Anderson, Alison Buchan, Barbara J. Campbell, Steven J. Hallam, Matthias Hess, Matthew B. Sullivan, David A. Walsh, Simon Roux, Karthik Anantharaman
Published 2021

Viral Ecogenomics of Arctic Cryopeg Brine and Sea Ice

by Zhi-Ping Zhong, Josephine Z. Rapp, James M. Wainaina, Natalie E. Solonenko, Heather Maughan, Shelly D. Carpenter, Zachary S. Cooper, Ho Bin Jang, Benjamin Bolduc, Jody W. Deming, Matthew B. Sullivan
Published 2020

Environmental Viral Genomes Shed New Light on Virus-Host Interactions in the Ocean

by Yosuke Nishimura, Hiroyasu Watai, Takashi Honda, Tomoko Mihara, Kimiho Omae, Simon Roux, Romain Blanc-Mathieu, Keigo Yamamoto, Pascal Hingamp, Yoshihiko Sako, Matthew B. Sullivan, Susumu Goto, Hiroyuki Ogata, Takashi Yoshida
Published 2017

Single-virus genomics reveals hidden cosmopolitan and abundant viruses

by Francisco Martinez-Hernandez, Oscar Fornas, Monica Lluesma Gomez, Benjamin Bolduc, Maria Jose de la Cruz Peña, Joaquín Martínez Martínez, Josefa Anton, Josep M. Gasol, Riccardo Rosselli, Francisco Rodriguez-Valera, Matthew B. Sullivan, Silvia G. Acinas, Manuel Martinez-Garcia
Published 2017

Diel cycle of sea spray aerosol concentration

by J. Michel Flores, Guillaume Bourdin, Alexander B. Kostinski, Orit Altaratz, Guy Dagan, Fabien Lombard, Nils Haëntjens, Emmanuel Boss, Matthew B. Sullivan, Gabriel Gorsky, Naama Lang-Yona, Miri Trainic, Sarah Romac, Christian R. Voolstra, Yinon Rudich, Assaf Vardi, Ilan Koren
Published 2021

Soil Viruses Are Underexplored Players in Ecosystem Carbon Processing

by Gareth Trubl, Ho Bin Jang, Simon Roux, Joanne B. Emerson, Natalie Solonenko, Dean R. Vik, Lindsey Solden, Jared Ellenbogen, Alexander T. Runyon, Benjamin Bolduc, Ben J. Woodcroft, Scott R. Saleska, Gene W. Tyson, Kelly C. Wrighton, Matthew B. Sullivan, Virginia I. Rich
Published 2018

Macroscale patterns of oceanic zooplankton composition and size structure

by Manoela C. Brandão, Fabio Benedetti, Séverine Martini, Yawouvi Dodji Soviadan, Jean-Olivier Irisson, Jean-Baptiste Romagnan, Amanda Elineau, Corinne Desnos, Laëtitia Jalabert, Andrea S. Freire, Marc Picheral, Lionel Guidi, Gabriel Gorsky, Chris Bowler, Lee Karp-Boss, Nicolas Henry, Colomban de Vargas, Matthew B. Sullivan, Tara Oceans Consortium Coordinators, Lars Stemmann, Fabien Lombard
Published 2021

Author Correction: Macroscale patterns of oceanic zooplankton composition and size structure

by Manoela C. Brandão, Fabio Benedetti, Séverine Martini, Yawouvi Dodji Soviadan, Jean-Olivier Irisson, Jean-Baptiste Romagnan, Amanda Elineau, Corinne Desnos, Laëtitia Jalabert, Andrea S. Freire, Marc Picheral, Lionel Guidi, Gabriel Gorsky, Chris Bowler, Lee Karp-Boss, Nicolas Henry, Colomban de Vargas, Matthew B. Sullivan, Tara Oceans Consortium Coordinators, Lars Stemmann, Fabien Lombard
Published 2021

On the Origin of Reverse Transcriptase-Using CRISPR-Cas Systems and Their Hyperdiverse, Enigmatic Spacer Repertoires

by Sukrit Silas, Kira S. Makarova, Sergey Shmakov, David Páez-Espino, Georg Mohr, Yi Liu, Michelle Davison, Simon Roux, Siddharth R. Krishnamurthy, Becky Xu Hua Fu, Loren L. Hansen, David Wang, Matthew B. Sullivan, Andrew Millard, Martha R. Clokie, Devaki Bhaya, Alan M. Lambowitz, Nikos C. Kyrpides, Eugene V. Koonin, Andrew Z. Fire
Published 2017

Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities

by Silvia G. Acinas, Pablo Sánchez, Guillem Salazar, Francisco M. Cornejo-Castillo, Marta Sebastián, Ramiro Logares, Marta Royo-Llonch, Lucas Paoli, Shinichi Sunagawa, Pascal Hingamp, Hiroyuki Ogata, Gipsi Lima-Mendez, Simon Roux, José M. González, Jesús M. Arrieta, Intikhab S. Alam, Allan Kamau, Chris Bowler, Jeroen Raes, Stéphane Pesant, Peer Bork, Susana Agustí, Takashi Gojobori, Dolors Vaqué, Matthew B. Sullivan, Carlos Pedrós-Alió, Ramon Massana, Carlos M. Duarte, Josep M. Gasol
Published 2021

Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans

by Yoann Seeleuthner, Samuel Mondy, Vincent Lombard, Quentin Carradec, Eric Pelletier, Marc Wessner, Jade Leconte, Jean-François Mangot, Julie Poulain, Karine Labadie, Ramiro Logares, Shinichi Sunagawa, Véronique de Berardinis, Marcel Salanoubat, Céline Dimier, Stefanie Kandels-Lewis, Marc Picheral, Sarah Searson, Tara Oceans Coordinators, Stephane Pesant, Nicole Poulton, Ramunas Stepanauskas, Peer Bork, Chris Bowler, Pascal Hingamp, Matthew B. Sullivan, Daniele Iudicone, Ramon Massana, Jean-Marc Aury, Bernard Henrissat, Eric Karsenti, Olivier Jaillon, Mike Sieracki, Colomban de Vargas, Patrick Wincker
Published 2018

A global ocean atlas of eukaryotic genes

by Quentin Carradec, Eric Pelletier, Corinne Da Silva, Adriana Alberti, Yoann Seeleuthner, Romain Blanc-Mathieu, Gipsi Lima-Mendez, Fabio Rocha, Leila Tirichine, Karine Labadie, Amos Kirilovsky, Alexis Bertrand, Stefan Engelen, Mohammed-Amin Madoui, Raphaël Méheust, Julie Poulain, Sarah Romac, Daniel J. Richter, Genki Yoshikawa, Céline Dimier, Stefanie Kandels-Lewis, Marc Picheral, Sarah Searson, Tara Oceans Coordinators, Olivier Jaillon, Jean-Marc Aury, Eric Karsenti, Matthew B. Sullivan, Shinichi Sunagawa, Peer Bork, Fabrice Not, Pascal Hingamp, Jeroen Raes, Lionel Guidi, Hiroyuki Ogata, Colomban de Vargas, Daniele Iudicone, Chris Bowler, Patrick Wincker
Published 2018