Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak

por Simon Dellicour, Guy Baele, Gytis Dudas, Nuno R. Faria, Oliver G. Pybus, Marc A. Suchard, Andrew Rambaut, Philippe Lemey
Publicado 2018

Single cell analysis of lymph node tissue from HIV-1 infected patients reveals that the majority of CD4+ T-cells contain one HIV-1 DNA molecule.

por Lina Josefsson, Sarah Palmer, Nuno R Faria, Philippe Lemey, Joseph Casazza, David Ambrozak, Mary Kearney, Wei Shao, Shyamasundaran Kottilil, Michael Sneller, John Mellors, John M Coffin, Frank Maldarelli
Publicado 2013

Dataset on SARS-CoV-2 non-pharmaceutical interventions in Brazilian municipalities

por Andreza Aruska de Souza Santos, Darlan da Silva Candido, William Marciel de Souza, Lewis Buss, Sabrina L. Li, Rafael H. M. Pereira, Chieh-Hsi Wu, Ester C. Sabino, Nuno R. Faria
Publicado 2021

Clusters of SARS-CoV-2 Lineage B.1.1.7 Infection after Vaccination with Adenovirus-Vectored and Inactivated Vaccines

por William M. de Souza, Stéfanie P. Muraro, Gabriela F. Souza, Mariene R. Amorim, Renata Sesti-Costa, Luciana S. Mofatto, Julia Forato, Priscilla P. Barbosa, Daniel A. Toledo-Teixeira, Karina Bispo-dos-Santos, Pierina L. Parise, Natalia S. Brunetti, Joselia C. O. Moreira, Vitor A. Costa, Daniela M. Cardozo, Maria L. Moretti, Silvia Barros-Mazon, Gabriela F. Marchesi, Christiane Ambrosio, Fernando R. Spilki, Valeria C. Almeida, Andre S. Vieira, Lair Zambon, Alessandro S. Farias, Marcelo Addas-Carvalho, Bruno D. Benites, Rafael E. Marques, Ester C. Sabino, Andrea B. Von Zuben, Scott C. Weaver, Nuno R. Faria, Fabiana Granja, Rodrigo N. Angerami, José Luiz Proença-Módena
Publicado 2021

Genomic Surveillance of Yellow Fever Virus Epizootic in São Paulo, Brazil, 2016 - 2018.

por Sarah C Hill, Renato de Souza, Julien Thézé, Ingra Claro, Renato S Aguiar, Leandro Abade, Fabiana C P Santos, Mariana S Cunha, Juliana S Nogueira, Flavia C S Salles, Iray M Rocco, Adriana Y Maeda, Fernanda G S Vasami, Louis du Plessis, Paola P Silveira, Jaqueline G de Jesus, Joshua Quick, Natália C C A Fernandes, Juliana M Guerra, Rodrigo A Réssio, Marta Giovanetti, Luiz C J Alcantara, Cinthya S Cirqueira, Josué Díaz-Delgado, Fernando L L Macedo, Maria do Carmo S T Timenetsky, Regiane de Paula, Roberta Spinola, Juliana Telles de Deus, Luís F Mucci, Rosa Maria Tubaki, Regiane M T de Menezes, Patrícia L Ramos, Andre L de Abreu, Laura N Cruz, Nick Loman, Simon Dellicour, Oliver G Pybus, Ester C Sabino, Nuno R Faria
Publicado 2020

Multiplex qPCR discriminates variants of concern to enhance global surveillance of SARS-CoV-2.

por Chantal B F Vogels, Mallery I Breban, Isabel M Ott, Tara Alpert, Mary E Petrone, Anne E Watkins, Chaney C Kalinich, Rebecca Earnest, Jessica E Rothman, Jaqueline Goes de Jesus, Ingra Morales Claro, Giulia Magalhães Ferreira, Myuki A E Crispim, Brazil-UK CADDE Genomic Network, Lavanya Singh, Houriiyah Tegally, Ugochukwu J Anyaneji, Network for Genomic Surveillance in South Africa, Emma B Hodcroft, Christopher E Mason, Gaurav Khullar, Jessica Metti, Joel T Dudley, Matthew J MacKay, Megan Nash, Jianhui Wang, Chen Liu, Pei Hui, Steven Murphy, Caleb Neal, Eva Laszlo, Marie L Landry, Anthony Muyombwe, Randy Downing, Jafar Razeq, Tulio de Oliveira, Nuno R Faria, Ester C Sabino, Richard A Neher, Joseph R Fauver, Nathan D Grubaugh
Publicado 2021