Split it up and see: using proxies to highlight divergent inter-populational performances in aquaculture standardised conditions

par Lola Toomey, Simon Dellicour, Andrzej Kapusta, Daniel Żarski, Frederik Buhrke, Sylvain Milla, Pascal Fontaine, Thomas Lecocq
Publié 2021

Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak

par Simon Dellicour, Guy Baele, Gytis Dudas, Nuno R. Faria, Oliver G. Pybus, Marc A. Suchard, Andrew Rambaut, Philippe Lemey
Publié 2018

Exploiting genomic surveillance to map the spatio-temporal dispersal of SARS-CoV-2 spike mutations in Belgium across 2020

par Nena Bollen, Maria Artesi, Keith Durkin, Samuel L. Hong, Barney Potter, Bouchra Boujemla, Bert Vanmechelen, Joan Martí-Carreras, Tony Wawina-Bokalanga, Cécile Meex, Sébastien Bontems, Marie-Pierre Hayette, Emmanuel André, Piet Maes, Vincent Bours, Guy Baele, Simon Dellicour
Publié 2021

Host relatedness and landscape connectivity shape pathogen spread in the puma, a large secretive carnivore

par Nicholas M. Fountain-Jones, Simona Kraberger, Roderick B. Gagne, Daryl R. Trumbo, Patricia E. Salerno, W. Chris Funk, Kevin Crooks, Roman Biek, Mathew Alldredge, Ken Logan, Guy Baele, Simon Dellicour, Holly B. Ernest, Sue VandeWoude, Scott Carver, Meggan E. Craft
Publié 2021

Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework

par Simon Dellicour, Sebastian Lequime, Bram Vrancken, Mandev S. Gill, Paul Bastide, Karthik Gangavarapu, Nathaniel L. Matteson, Yi Tan, Louis du Plessis, Alexander A. Fisher, Martha I. Nelson, Marius Gilbert, Marc A. Suchard, Kristian G. Andersen, Nathan D. Grubaugh, Oliver G. Pybus, Philippe Lemey
Publié 2020

Genomic sequencing of SARS-CoV-2 in Rwanda reveals the importance of incoming travelers on lineage diversity

par Yvan Butera, Enatha Mukantwari, Maria Artesi, Jeanne d’arc Umuringa, Áine Niamh O’Toole, Verity Hill, Stefan Rooke, Samuel Leandro Hong, Simon Dellicour, Onesphore Majyambere, Sebastien Bontems, Bouchra Boujemla, Josh Quick, Paola Cristina Resende, Nick Loman, Esperance Umumararungu, Alice Kabanda, Marylin Milumbu Murindahabi, Patrick Tuyisenge, Misbah Gashegu, Jean Paul Rwabihama, Reuben Sindayiheba, Djordje Gikic, Jacob Souopgui, Wilfred Ndifon, Robert Rutayisire, Swaibu Gatare, Tharcisse Mpunga, Daniel Ngamije, Vincent Bours, Andrew Rambaut, Sabin Nsanzimana, Guy Baele, Keith Durkin, Leon Mutesa, Nadine Rujeni
Publié 2021

Genomic Surveillance of Yellow Fever Virus Epizootic in São Paulo, Brazil, 2016 - 2018.

par Sarah C Hill, Renato de Souza, Julien Thézé, Ingra Claro, Renato S Aguiar, Leandro Abade, Fabiana C P Santos, Mariana S Cunha, Juliana S Nogueira, Flavia C S Salles, Iray M Rocco, Adriana Y Maeda, Fernanda G S Vasami, Louis du Plessis, Paola P Silveira, Jaqueline G de Jesus, Joshua Quick, Natália C C A Fernandes, Juliana M Guerra, Rodrigo A Réssio, Marta Giovanetti, Luiz C J Alcantara, Cinthya S Cirqueira, Josué Díaz-Delgado, Fernando L L Macedo, Maria do Carmo S T Timenetsky, Regiane de Paula, Roberta Spinola, Juliana Telles de Deus, Luís F Mucci, Rosa Maria Tubaki, Regiane M T de Menezes, Patrícia L Ramos, Andre L de Abreu, Laura N Cruz, Nick Loman, Simon Dellicour, Oliver G Pybus, Ester C Sabino, Nuno R Faria
Publié 2020