High-Throughput Metagenomic Technologies for Complex Microbial Community Analysis: Open and Closed Formats

by Jizhong Zhou, Zhili He, Yunfeng Yang, Ye Deng, Susannah G. Tringe, Lisa Alvarez-Cohen
Published 2015

Host genotype and age shape the leaf and root microbiomes of a wild perennial plant

by Maggie R. Wagner, Derek S Lundberg, Tijana G. del Rio, Susannah G. Tringe, Jeffery L. Dangl, Thomas Mitchell-Olds
Published 2016

Landscape topography structures the soil microbiome in arctic polygonal tundra

by Neslihan Taş, Emmanuel Prestat, Shi Wang, Yuxin Wu, Craig Ulrich, Timothy Kneafsey, Susannah G. Tringe, Margaret S. Torn, Susan S. Hubbard, Janet K. Jansson
Published 2018

Comparative metagenomic and metatranscriptomic analysis of hindgut paunch microbiota in wood- and dung-feeding higher termites.

by Shaomei He, Natalia Ivanova, Edward Kirton, Martin Allgaier, Claudia Bergin, Rudolf H Scheffrahn, Nikos C Kyrpides, Falk Warnecke, Susannah G Tringe, Philip Hugenholtz
Published 2013

Unusual Metabolism and Hypervariation in the Genome of a Gracilibacterium (BD1-5) from an Oil-Degrading Community

by Christian M. K. Sieber, Blair G. Paul, Cindy J. Castelle, Ping Hu, Susannah G. Tringe, David L. Valentine, Gary L. Andersen, Jillian F. Banfield
Published 2019

Ecophysiology of Freshwater Verrucomicrobia Inferred from Metagenome-Assembled Genomes

by Shaomei He, Sarah L. R. Stevens, Leong-Keat Chan, Stefan Bertilsson, Tijana Glavina del Rio, Susannah G. Tringe, Rex R. Malmstrom, Katherine D. McMahon
Published 2017

The rhizosphere microbiome of burned holm-oak: potential role of the genus Arthrobacter in the recovery of burned soils

by Antonio J. Fernández-González, Pilar Martínez-Hidalgo, José F. Cobo-Díaz, Pablo J. Villadas, Eustoquio Martínez-Molina, Nicolás Toro, Susannah G. Tringe, Manuel Fernández-López
Published 2017

Metagenomic profiling reveals lignocellulose degrading system in a microbial community associated with a wood-feeding beetle.

by Erin D Scully, Scott M Geib, Kelli Hoover, Ming Tien, Susannah G Tringe, Kerrie W Barry, Tijana Glavina del Rio, Mansi Chovatia, Joshua R Herr, John E Carlson
Published 2013

Patterns in Wetland Microbial Community Composition and Functional Gene Repertoire Associated with Methane Emissions

by Shaomei He, Stephanie A. Malfatti, Jack W. McFarland, Frank E. Anderson, Amrita Pati, Marcel Huntemann, Julien Tremblay, Tijana Glavina del Rio, Mark P. Waldrop, Lisamarie Windham-Myers, Susannah G. Tringe
Published 2015

Convergent Bacterial Microbiotas in the Fungal Agricultural Systems of Insects

by Frank O. Aylward, Garret Suen, Peter H. W. Biedermann, Aaron S. Adams, Jarrod J. Scott, Stephanie A. Malfatti, Tijana Glavina del Rio, Susannah G. Tringe, Michael Poulsen, Kenneth F. Raffa, Kier D. Klepzig, Cameron R. Currie
Published 2014

Proteogenomic analysis of a thermophilic bacterial consortium adapted to deconstruct switchgrass.

by Patrik D'haeseleer, John M Gladden, Martin Allgaier, Patrik S G Chain, Susannah G Tringe, Stephanie A Malfatti, Joshua T Aldrich, Carrie D Nicora, Errol W Robinson, Ljiljana Paša-Tolić, Philip Hugenholtz, Blake A Simmons, Steven W Singer
Published 2013

The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole

by Kara Martin, Katrin Schmidt, Andrew Toseland, Chris A. Boulton, Kerrie Barry, Bánk Beszteri, Corina P. D. Brussaard, Alicia Clum, Chris G. Daum, Emiley Eloe-Fadrosh, Allison Fong, Brian Foster, Bryce Foster, Michael Ginzburg, Marcel Huntemann, Natalia N. Ivanova, Nikos C. Kyrpides, Erika Lindquist, Supratim Mukherjee, Krishnaveni Palaniappan, T. B. K. Reddy, Mariam R. Rizkallah, Simon Roux, Klaas Timmermans, Susannah G. Tringe, Willem H. van de Poll, Neha Varghese, Klaus U. Valentin, Timothy M. Lenton, Igor V. Grigoriev, Richard M. Leggett, Vincent Moulton, Thomas Mock
Published 2021