Positive and strongly relaxed purifying selection drive the evolution of repeats in proteins

por Erez Persi, Yuri I. Wolf, Eugene V Koonin
Publicado 2016

Interplay between DNA damage repair and apoptosis shapes cancer evolution through aneuploidy and microsatellite instability

por Noam Auslander, Yuri I. Wolf, Eugene V. Koonin
Publicado 2020

Predictability of evolutionary trajectories in fitness landscapes.

por Alexander E Lobkovsky, Yuri I Wolf, Eugene V Koonin
Publicado 2011

Selection for Reducing Energy Cost of Protein Production Drives the GC Content and Amino Acid Composition Bias in Gene Transfer Agents

por Roman Kogay, Yuri I. Wolf, Eugene V. Koonin, Olga Zhaxybayeva
Publicado 2020

Erratum for Kogay et al., “Selection for Reducing Energy Cost of Protein Production Drives the GC Content and Amino Acid Composition Bias in Gene Transfer Agents”

por Roman Kogay, Yuri I. Wolf, Eugene V. Koonin, Olga Zhaxybayeva
Publicado 2020

Gene gain and loss push prokaryotes beyond the homologous recombination barrier and accelerate genome sequence divergence

por Jaime Iranzo, Yuri I. Wolf, Eugene V. Koonin, Itamar Sela
Publicado 2019

Ancient Gene Capture and Recent Gene Loss Shape the Evolution of Orthopoxvirus-Host Interaction Genes

por Tatiana G. Senkevich, Natalya Yutin, Yuri I. Wolf, Eugene V. Koonin, Bernard Moss
Publicado 2021

Antimicrobial Peptides, Polymorphic Toxins, and Self-Nonself Recognition Systems in Archaea: an Untapped Armory for Intermicrobial Conflicts

por Kira S. Makarova, Yuri I. Wolf, Svetlana Karamycheva, Dapeng Zhang, L. Aravind, Eugene V. Koonin
Publicado 2019

Viral Diversity Threshold for Adaptive Immunity in Prokaryotes

por Ariel D. Weinberger, Yuri I. Wolf, Alexander E. Lobkovsky, Michael S. Gilmore, Eugene V. Koonin
Publicado 2012

Allosteric Activation of SARS-CoV-2 RNA-Dependent RNA Polymerase by Remdesivir Triphosphate and Other Phosphorylated Nucleotides

por Bing Wang, Vladimir Svetlov, Yuri I. Wolf, Eugene V. Koonin, Evgeny Nudler, Irina Artsimovitch
Publicado 2021

The CRISPR Spacer Space Is Dominated by Sequences from Species-Specific Mobilomes

por Sergey A. Shmakov, Vassilii Sitnik, Kira S. Makarova, Yuri I. Wolf, Konstantin V. Severinov, Eugene V. Koonin
Publicado 2017

The vast, conserved mammalian lincRNome.

por David Managadze, Alexander E Lobkovsky, Yuri I Wolf, Svetlana A Shabalina, Igor B Rogozin, Eugene V Koonin
Publicado 2013

Translational coupling via termination-reinitiation in archaea and bacteria

por Madeleine Huber, Guilhem Faure, Sebastian Laass, Esther Kolbe, Kristina Seitz, Christina Wehrheim, Yuri I. Wolf, Eugene V. Koonin, Jörg Soppa
Publicado 2019

Origins and Evolution of the Global RNA Virome

por Yuri I. Wolf, Darius Kazlauskas, Jaime Iranzo, Adriana Lucía-Sanz, Jens H. Kuhn, Mart Krupovic, Valerian V. Dolja, Eugene V. Koonin
Publicado 2018

Reply to Holmes and Duchêne, “Can Sequence Phylogenies Safely Infer the Origin of the Global Virome?”: Deep Phylogenetic Analysis of RNA Viruses Is Highly Challenging but Not Meani...

por Yuri I. Wolf, Darius Kazlauskas, Jaime Iranzo, Adriana Lucía-Sanz, Jens H. Kuhn, Mart Krupovic, Valerian V. Dolja, Eugene V. Koonin
Publicado 2019

Analysis of metagenome-assembled viral genomes from the human gut reveals diverse putative CrAss-like phages with unique genomic features

por Natalya Yutin, Sean Benler, Sergei A. Shmakov, Yuri I. Wolf, Igor Tolstoy, Mike Rayko, Dmitry Antipov, Pavel A. Pevzner, Eugene V. Koonin
Publicado 2021

Machine-learning approach expands the repertoire of anti-CRISPR protein families

por Ayal B. Gussow, Allyson E. Park, Adair L. Borges, Sergey A. Shmakov, Kira S. Makarova, Yuri I. Wolf, Joseph Bondy-Denomy, Eugene V. Koonin
Publicado 2020

Virus Genomes from Deep Sea Sediments Expand the Ocean Megavirome and Support Independent Origins of Viral Gigantism

por Disa Bäckström, Natalya Yutin, Steffen L. Jørgensen, Jennah Dharamshi, Felix Homa, Katarzyna Zaremba-Niedwiedzka, Anja Spang, Yuri I. Wolf, Eugene V. Koonin, Thijs J. G. Ettema
Publicado 2019

‘ARMAN’ archaea depend on association with euryarchaeal host in culture and in situ

por Olga V. Golyshina, Stepan V. Toshchakov, Kira S. Makarova, Sergey N. Gavrilov, Aleksei A. Korzhenkov, Violetta La Cono, Erika Arcadi, Taras Y. Nechitaylo, Manuel Ferrer, Ilya V. Kublanov, Yuri I. Wolf, Michail M. Yakimov, Peter N. Golyshin
Publicado 2017