Positive and strongly relaxed purifying selection drive the evolution of repeats in proteins

par Erez Persi, Yuri I. Wolf, Eugene V Koonin
Publié 2016

Interplay between DNA damage repair and apoptosis shapes cancer evolution through aneuploidy and microsatellite instability

par Noam Auslander, Yuri I. Wolf, Eugene V. Koonin
Publié 2020

Predictability of evolutionary trajectories in fitness landscapes.

par Alexander E Lobkovsky, Yuri I Wolf, Eugene V Koonin
Publié 2011

Selection for Reducing Energy Cost of Protein Production Drives the GC Content and Amino Acid Composition Bias in Gene Transfer Agents

par Roman Kogay, Yuri I. Wolf, Eugene V. Koonin, Olga Zhaxybayeva
Publié 2020

Erratum for Kogay et al., “Selection for Reducing Energy Cost of Protein Production Drives the GC Content and Amino Acid Composition Bias in Gene Transfer Agents”

par Roman Kogay, Yuri I. Wolf, Eugene V. Koonin, Olga Zhaxybayeva
Publié 2020

Gene gain and loss push prokaryotes beyond the homologous recombination barrier and accelerate genome sequence divergence

par Jaime Iranzo, Yuri I. Wolf, Eugene V. Koonin, Itamar Sela
Publié 2019

Ancient Gene Capture and Recent Gene Loss Shape the Evolution of Orthopoxvirus-Host Interaction Genes

par Tatiana G. Senkevich, Natalya Yutin, Yuri I. Wolf, Eugene V. Koonin, Bernard Moss
Publié 2021

Antimicrobial Peptides, Polymorphic Toxins, and Self-Nonself Recognition Systems in Archaea: an Untapped Armory for Intermicrobial Conflicts

par Kira S. Makarova, Yuri I. Wolf, Svetlana Karamycheva, Dapeng Zhang, L. Aravind, Eugene V. Koonin
Publié 2019

Viral Diversity Threshold for Adaptive Immunity in Prokaryotes

par Ariel D. Weinberger, Yuri I. Wolf, Alexander E. Lobkovsky, Michael S. Gilmore, Eugene V. Koonin
Publié 2012

Allosteric Activation of SARS-CoV-2 RNA-Dependent RNA Polymerase by Remdesivir Triphosphate and Other Phosphorylated Nucleotides

par Bing Wang, Vladimir Svetlov, Yuri I. Wolf, Eugene V. Koonin, Evgeny Nudler, Irina Artsimovitch
Publié 2021

The CRISPR Spacer Space Is Dominated by Sequences from Species-Specific Mobilomes

par Sergey A. Shmakov, Vassilii Sitnik, Kira S. Makarova, Yuri I. Wolf, Konstantin V. Severinov, Eugene V. Koonin
Publié 2017

The vast, conserved mammalian lincRNome.

par David Managadze, Alexander E Lobkovsky, Yuri I Wolf, Svetlana A Shabalina, Igor B Rogozin, Eugene V Koonin
Publié 2013

Translational coupling via termination-reinitiation in archaea and bacteria

par Madeleine Huber, Guilhem Faure, Sebastian Laass, Esther Kolbe, Kristina Seitz, Christina Wehrheim, Yuri I. Wolf, Eugene V. Koonin, Jörg Soppa
Publié 2019

Origins and Evolution of the Global RNA Virome

par Yuri I. Wolf, Darius Kazlauskas, Jaime Iranzo, Adriana Lucía-Sanz, Jens H. Kuhn, Mart Krupovic, Valerian V. Dolja, Eugene V. Koonin
Publié 2018

Reply to Holmes and Duchêne, “Can Sequence Phylogenies Safely Infer the Origin of the Global Virome?”: Deep Phylogenetic Analysis of RNA Viruses Is Highly Challenging but Not Meani...

par Yuri I. Wolf, Darius Kazlauskas, Jaime Iranzo, Adriana Lucía-Sanz, Jens H. Kuhn, Mart Krupovic, Valerian V. Dolja, Eugene V. Koonin
Publié 2019

Analysis of metagenome-assembled viral genomes from the human gut reveals diverse putative CrAss-like phages with unique genomic features

par Natalya Yutin, Sean Benler, Sergei A. Shmakov, Yuri I. Wolf, Igor Tolstoy, Mike Rayko, Dmitry Antipov, Pavel A. Pevzner, Eugene V. Koonin
Publié 2021

Machine-learning approach expands the repertoire of anti-CRISPR protein families

par Ayal B. Gussow, Allyson E. Park, Adair L. Borges, Sergey A. Shmakov, Kira S. Makarova, Yuri I. Wolf, Joseph Bondy-Denomy, Eugene V. Koonin
Publié 2020

Virus Genomes from Deep Sea Sediments Expand the Ocean Megavirome and Support Independent Origins of Viral Gigantism

par Disa Bäckström, Natalya Yutin, Steffen L. Jørgensen, Jennah Dharamshi, Felix Homa, Katarzyna Zaremba-Niedwiedzka, Anja Spang, Yuri I. Wolf, Eugene V. Koonin, Thijs J. G. Ettema
Publié 2019

‘ARMAN’ archaea depend on association with euryarchaeal host in culture and in situ

par Olga V. Golyshina, Stepan V. Toshchakov, Kira S. Makarova, Sergey N. Gavrilov, Aleksei A. Korzhenkov, Violetta La Cono, Erika Arcadi, Taras Y. Nechitaylo, Manuel Ferrer, Ilya V. Kublanov, Yuri I. Wolf, Michail M. Yakimov, Peter N. Golyshin
Publié 2017