Viral evolution in the genomic age.

par Edward C Holmes
Publié 2007

Can Sequence Phylogenies Safely Infer the Origin of the Global Virome?

par Edward C. Holmes, Sebastián Duchêne
Publié 2019

The short-term effect of residential home energy retrofits on indoor air quality and microbial exposure: A case-control study.

par Mytien Nguyen, Eric C Holmes, Largus T Angenent
Publié 2021

Vortioxetine ameliorates anhedonic-like behaviour and promotes strategic cognitive performance in a rodent touchscreen task

par Lena-Sophie Martis, Kristoffer Højgaard, Megan C. Holmes, Betina Elfving, Ove Wiborg
Publié 2021

Metagenomic Identification of Viral Sequences in Laboratory Reagents

par Ashleigh F. Porter, Joanna Cobbin, Ci-Xiu Li, John-Sebastian Eden, Edward C. Holmes
Publié 2021

Spatial coding defects of hippocampal neural ensemble calcium activities in the triple-transgenic Alzheimer's disease mouse model

par Xiaoxiao Lin, Lujia Chen, David Baglietto-Vargas, Parsa Kamalipour, Qiao Ye, Frank M. LaFerla, Douglas A. Nitz, Todd C. Holmes, Xiangmin Xu
Publié 2022

Parasite Microbiome Project: Systematic Investigation of Microbiome Dynamics within and across Parasite-Host Interactions

par Nolwenn M. Dheilly, Daniel Bolnick, Seth Bordenstein, Paul J. Brindley, Cédric Figuères, Edward C. Holmes, Joaquín Martínez Martínez, Anna J. Phillips, Robert Poulin, Karyna Rosario
Publié 2017

Intrahost Dynamics of Antiviral Resistance in Influenza A Virus Reflect Complex Patterns of Segment Linkage, Reassortment, and Natural Selection

par Matthew B. Rogers, Timothy Song, Robert Sebra, Benjamin D. Greenbaum, Marie-Eve Hamelin, Adam Fitch, Alan Twaddle, Lijia Cui, Edward C. Holmes, Guy Boivin, Elodie Ghedin
Publié 2015

Short-Chain Fatty Acid Production by Gut Microbiota from Children with Obesity Differs According to Prebiotic Choice and Bacterial Community Composition

par Zachary C. Holmes, Justin D. Silverman, Holly K. Dressman, Zhengzheng Wei, Eric P. Dallow, Sarah C. Armstrong, Patrick C. Seed, John F. Rawls, Lawrence A. David
Publié 2020

Evolutionary history and attenuation of myxoma virus on two continents.

par Peter J Kerr, Elodie Ghedin, Jay V DePasse, Adam Fitch, Isabella M Cattadori, Peter J Hudson, David C Tscharke, Andrew F Read, Edward C Holmes
Publié 2012

Endemic dengue associated with the co-circulation of multiple viral lineages and localized density-dependent transmission.

par Jayna Raghwani, Andrew Rambaut, Edward C Holmes, Vu Ty Hang, Tran Tinh Hien, Jeremy Farrar, Bridget Wills, Niall J Lennon, Bruce W Birren, Matthew R Henn, Cameron P Simmons
Publié 2011

Transmission of equine influenza virus during an outbreak is characterized by frequent mixed infections and loose transmission bottlenecks.

par Joseph Hughes, Richard C Allen, Marc Baguelin, Katie Hampson, Gregory J Baillie, Debra Elton, J Richard Newton, Paul Kellam, James L N Wood, Edward C Holmes, Pablo R Murcia
Publié 2012

Molecular epidemiology of A/H3N2 and A/H1N1 influenza virus during a single epidemic season in the United States.

par Martha I Nelson, Laurel Edelman, David J Spiro, Alex R Boyne, Jayati Bera, Rebecca Halpin, Naomi Sengamalay, Elodie Ghedin, Mark A Miller, Lone Simonsen, Cecile Viboud, Edward C Holmes
Publié 2008

Publisher Correction: Sudden emergence of human infections with H7N9 avian influenza A virus in Hubei province, central China

par Jiafa Liu, Junqiang Xu, Linlin Liu, Xiaoman Wei, Yi Song, Bin Fang, Xiao Yu, Xiang Li, Guojun Ye, Yingying Du, Mingyue Chen, Weifeng Shi, Di Liu, Edward C. Holmes, Jie Cui
Publié 2018

Phylogeny and origins of hantaviruses harbored by bats, insectivores, and rodents.

par Wen-Ping Guo, Xian-Dan Lin, Wen Wang, Jun-Hua Tian, Mei-Li Cong, Hai-Lin Zhang, Miao-Ruo Wang, Run-Hong Zhou, Jian-Bo Wang, Ming-Hui Li, Jianguo Xu, Edward C Holmes, Yong-Zhen Zhang
Publié 2013

Genotypic and Phenotypic Diversity among Human Isolates of Akkermansia muciniphila

par Bradford Becken, Lauren Davey, Dustin R. Middleton, Katherine D. Mueller, Agastya Sharma, Zachary C. Holmes, Eric Dallow, Brenna Remick, Gregory M. Barton, Lawrence A. David, Jessica R. McCann, Sarah C. Armstrong, Per Malkus, Raphael H. Valdivia
Publié 2021

Evolution of an Eurasian avian-like influenza virus in naïve and vaccinated pigs.

par Pablo R Murcia, Joseph Hughes, Patrizia Battista, Lucy Lloyd, Gregory J Baillie, Ricardo H Ramirez-Gonzalez, Doug Ormond, Karen Oliver, Debra Elton, Jennifer A Mumford, Mario Caccamo, Paul Kellam, Bryan T Grenfell, Edward C Holmes, James L N Wood
Publié 2012

Spatial distributions of <i>X</i>_CO₂ seasonal cycle amplitude and phase over northern high-latitude regions

par N. Jacobs, W. R. Simpson, K. A. Graham, C. Holmes, F. Hase, T. Blumenstock, Q. Tu, M. Frey, M. Frey, M. K. Dubey, H. A. Parker, H. A. Parker, D. Wunch, R. Kivi, P. Heikkinen, J. Notholt, C. Petri, T. Warneke
Publié 2021

PHYRN: a robust method for phylogenetic analysis of highly divergent sequences.

par Gaurav Bhardwaj, Kyung Dae Ko, Yoojin Hong, Zhenhai Zhang, Ngai Lam Ho, Sree V Chintapalli, Lindsay A Kline, Matthew Gotlin, David Nicholas Hartranft, Morgen E Patterson, Foram Dave, Evan J Smith, Edward C Holmes, Randen L Patterson, Damian B van Rossum
Publié 2012

Genomic epidemiology reveals transmission patterns and dynamics of SARS-CoV-2 in Aotearoa New Zealand

par Jemma L. Geoghegan, Xiaoyun Ren, Matthew Storey, James Hadfield, Lauren Jelley, Sarah Jefferies, Jill Sherwood, Shevaun Paine, Sue Huang, Jordan Douglas, Fábio K. Mendes, Andrew Sporle, Michael G. Baker, David R. Murdoch, Nigel French, Colin R. Simpson, David Welch, Alexei J. Drummond, Edward C. Holmes, Sebastián Duchêne, Joep de Ligt
Publié 2020