Accessory Genome Dynamics and Structural Variation of <i>Shigella</i> from Persistent Infections

by Rebecca J. Bengtsson, Timothy J. Dallman, Hester Allen, P. Malaka De Silva, George Stenhouse, Caisey V. Pulford, Rebecca J. Bennett, Claire Jenkins, Kate S. Baker
Published 2021

Genomic epidemiology of Shigella in the United Kingdom shows transmission of pathogen sublineages and determinants of antimicrobial resistance

by Kate S. Baker, Timothy J. Dallman, Nigel Field, Tristan Childs, Holly Mitchell, Martin Day, François-Xavier Weill, Sophie Lefèvre, Mathieu Tourdjman, Gwenda Hughes, Claire Jenkins, Nicholas Thomson
Published 2018

Horizontal antimicrobial resistance transfer drives epidemics of multiple Shigella species

by Kate S. Baker, Timothy J. Dallman, Nigel Field, Tristan Childs, Holly Mitchell, Martin Day, François-Xavier Weill, Sophie Lefèvre, Mathieu Tourdjman, Gwenda Hughes, Claire Jenkins, Nicholas Thomson
Published 2018

Transposon Insertion Sequencing Elucidates Novel Gene Involvement in Susceptibility and Resistance to Phages T4 and T7 in <italic toggle="yes">Escherichia coli</italic> O157

by Lauren A. Cowley, Alison S. Low, Derek Pickard, Christine J. Boinett, Timothy J. Dallman, Martin Day, Neil Perry, David L. Gally, Julian Parkhill, Claire Jenkins, Amy K. Cain
Published 2018

Outbreak of Shiga toxin-producing Escherichia coli O157 linked with consumption of a fast-food product containing imported cucumbers, United Kingdom, August 2020

by Ranya Mulchandani, Clare Brehmer, Saira Butt, Bhavita Vishram, Melissa Harrison, Elizabeth Marchant, Simon Ferris, Frieda Jorgensen, Robert Smith, Gauri Godbole, Claire Jenkins, Timothy J. Dallman, Neville Q. Verlander, Nick Phin, Dan Todkill, Saheer Gharbia, Jeremy Hawker
Published 2021

Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei

by Jane Hawkey, Kalani Paranagama, Kate S. Baker, Rebecca J. Bengtsson, François-Xavier Weill, Nicholas R. Thomson, Stephen Baker, Louise Cerdeira, Zamin Iqbal, Martin Hunt, Danielle J. Ingle, Timothy J. Dallman, Claire Jenkins, Deborah A. Williamson, Kathryn E. Holt
Published 2021

Dissecting the molecular evolution of fluoroquinolone-resistant Shigella sonnei

by Hao Chung The, Christine Boinett, Duy Pham Thanh, Claire Jenkins, Francois-Xavier Weill, Benjamin P. Howden, Mary Valcanis, Niall De Lappe, Martin Cormican, Sonam Wangchuk, Ladaporn Bodhidatta, Carl J. Mason, To Nguyen Thi Nguyen, Tuyen Ha Thanh, Vinh Phat Voong, Vu Thuy Duong, Phu Huong Lan Nguyen, Paul Turner, Ryan Wick, Pieter-Jan Ceyssens, Guy Thwaites, Kathryn E. Holt, Nicholas R. Thomson, Maia A. Rabaa, Stephen Baker
Published 2019