Evolution and Epidemiology of Multidrug-Resistant <italic toggle="yes">Klebsiella pneumoniae</italic> in the United Kingdom and Ireland

por Danesh Moradigaravand, Veronique Martin, Sharon J. Peacock, Julian Parkhill
Publicado 2017

The Capsule Regulatory Network of <italic toggle="yes">Klebsiella pneumoniae</italic> Defined by density-TraDISort

por Matthew J. Dorman, Theresa Feltwell, David A. Goulding, Julian Parkhill, Francesca L. Short
Publicado 2018

Complete Assembly of <named-content content-type="genus-species">Escherichia coli</named-content> Sequence Type 131 Genomes Using Long Reads Demonstrates Antibiotic Resistance Gene...

por Arun Gonzales Decano, Catherine Ludden, Theresa Feltwell, Kim Judge, Julian Parkhill, Tim Downing
Publicado 2019

Improved Prediction of Bacterial Genotype-Phenotype Associations Using Interpretable Pangenome-Spanning Regressions

por John A. Lees, T. Tien Mai, Marco Galardini, Nicole E. Wheeler, Samuel T. Horsfield, Julian Parkhill, Jukka Corander
Publicado 2020

Community outbreaks of group A Streptococcus revealed by genome sequencing

por Claire E. Turner, Luke Bedford, Nicholas M. Brown, Kim Judge, M. Estée Török, Julian Parkhill, Sharon J. Peacock
Publicado 2017

Investigating the <named-content content-type="genus-species">Campylobacter jejuni</named-content> Transcriptional Response to Host Intestinal Extracts Reveals the Involvement of a...

por Martha M. Liu, Christine J. Boinett, Anson C. K. Chan, Julian Parkhill, Michael E. P. Murphy, Erin C. Gaynor
Publicado 2018

Genomic surveillance reveals low prevalence of livestock-associated methicillin-resistant Staphylococcus aureus in the East of England

por Ewan M. Harrison, Francesc Coll, Michelle S. Toleman, Beth Blane, Nicholas M. Brown, M. Estee Török, Julian Parkhill, Sharon J. Peacock
Publicado 2017

Transient Silencing of Antibiotic Resistance by Mutation Represents a Significant Potential Source of Unanticipated Therapeutic Failure

por Louise Kime, Christopher P. Randall, Frank I. Banda, Francesc Coll, John Wright, Joseph Richardson, Joanna Empel, Julian Parkhill, Alex J. O’Neill
Publicado 2019

Novel Determinants of Antibiotic Resistance: Identification of Mutated Loci in Highly Methicillin-Resistant Subpopulations of Methicillin-Resistant <named-content content-type="gen...

por Janina Dordel, Choonkeun Kim, Marilyn Chung, María Pardos de la Gándara, Matthew T. J. Holden, Julian Parkhill, Hermínia de Lencastre, Stephen D. Bentley, Alexander Tomasz
Publicado 2014

Diversification of Colonization Factors in a Multidrug-Resistant <named-content content-type="genus-species">Escherichia coli</named-content> Lineage Evolving under Negative Freque...

por Alan McNally, Teemu Kallonen, Christopher Connor, Khalil Abudahab, David M. Aanensen, Carolyne Horner, Sharon J. Peacock, Julian Parkhill, Nicholas J. Croucher, Jukka Corander
Publicado 2019

Genome-wide mutational biases fuel transcriptional diversity in the Mycobacterium tuberculosis complex

por Álvaro Chiner-Oms, Michael Berney, Christine Boinett, Fernando González-Candelas, Douglas B. Young, Sebastien Gagneux, William R. Jacobs, Julian Parkhill, Teresa Cortes, Iñaki Comas
Publicado 2019

Transposon Insertion Sequencing Elucidates Novel Gene Involvement in Susceptibility and Resistance to Phages T4 and T7 in <italic toggle="yes">Escherichia coli</italic> O157

por Lauren A. Cowley, Alison S. Low, Derek Pickard, Christine J. Boinett, Timothy J. Dallman, Martin Day, Neil Perry, David L. Gally, Julian Parkhill, Claire Jenkins, Amy K. Cain
Publicado 2018

Pivotal Roles for pH, Lactate, and Lactate-Utilizing Bacteria in the Stability of a Human Colonic Microbial Ecosystem

por Shui Ping Wang, Luis A. Rubio, Sylvia H. Duncan, Gillian E. Donachie, Grietje Holtrop, Galiana Lo, Freda M. Farquharson, Josef Wagner, Julian Parkhill, Petra Louis, Alan W. Walker, Harry J. Flint
Publicado 2020

Emergence of a New Epidemic <named-content content-type="genus-species">Neisseria meningitidis</named-content> Serogroup A Clone in the African Meningitis Belt: High-Resolution Pic...

por Araceli Lamelas, Simon R. Harris, Katharina Röltgen, Jean-Pierre Dangy, Julia Hauser, Robert A. Kingsley, Thomas R. Connor, Ali Sie, Abraham Hodgson, Gordon Dougan, Julian Parkhill, Stephen D. Bentley, Gerd Pluschke
Publicado 2014

Genomic Analysis and Comparison of Two Gonorrhea Outbreaks

por Xavier Didelot, Janina Dordel, Lilith K. Whittles, Caitlin Collins, Nicole Bilek, Cynthia J. Bishop, Peter J. White, David M. Aanensen, Julian Parkhill, Stephen D. Bentley, Brian G. Spratt, Simon R. Harris
Publicado 2016

Genomic Dissection of an Icelandic Epidemic of Respiratory Disease in Horses and Associated Zoonotic Cases

por Sigríður Björnsdóttir, Simon R. Harris, Vilhjálmur Svansson, Eggert Gunnarsson, Ólöf G. Sigurðardóttir, Kristina Gammeljord, Karen F. Steward, J. Richard Newton, Carl Robinson, Amelia R. L. Charbonneau, Julian Parkhill, Matthew T. G. Holden, Andrew S. Waller
Publicado 2017

Sequence element enrichment analysis to determine the genetic basis of bacterial phenotypes

por John A. Lees, Minna Vehkala, Niko Välimäki, Simon R. Harris, Claire Chewapreecha, Nicholas J. Croucher, Pekka Marttinen, Mark R. Davies, Andrew C. Steer, Steven Y. C. Tong, Antti Honkela, Julian Parkhill, Stephen D. Bentley, Jukka Corander
Publicado 2016

Genomic Surveillance of <named-content content-type="genus-species">Enterococcus faecium</named-content> Reveals Limited Sharing of Strains and Resistance Genes between Livestock a...

por Theodore Gouliouris, Kathy E. Raven, Catherine Ludden, Beth Blane, Jukka Corander, Carolyne S. Horner, Juan Hernandez-Garcia, Paul Wood, Nazreen F. Hadjirin, Milorad Radakovic, Mark A. Holmes, Marcus de Goffau, Nicholas M. Brown, Julian Parkhill, Sharon J. Peacock
Publicado 2018

Recombination in <named-content content-type="genus-species">Streptococcus pneumoniae</named-content> Lineages Increase with Carriage Duration and Size of the Polysaccharide Capsul...

por Chrispin Chaguza, Cheryl P. Andam, Simon R. Harris, Jennifer E. Cornick, Marie Yang, Laura Bricio-Moreno, Arox W. Kamng’ona, Julian Parkhill, Neil French, Robert S. Heyderman, Aras Kadioglu, Dean B. Everett, Stephen D. Bentley, William P. Hanage
Publicado 2016

The impact of different DNA extraction kits and laboratories upon the assessment of human gut microbiota composition by 16S rRNA gene sequencing.

por Nicholas A Kennedy, Alan W Walker, Susan H Berry, Sylvia H Duncan, Freda M Farquarson, Petra Louis, John M Thomson, UK IBD Genetics Consortium, Jack Satsangi, Harry J Flint, Julian Parkhill, Charlie W Lees, Georgina L Hold
Publicado 2014