Rapidly Processed Stool Swabs Approximate Stool Microbiota Profiles

por Nicholas A. Bokulich, Juan Maldonado, Dae-Wook Kang, Rosa Krajmalnik-Brown, J. Gregory Caporaso
Publicado 2019

Species abundance information improves sequence taxonomy classification accuracy

por Benjamin D. Kaehler, Nicholas A. Bokulich, Daniel McDonald, Rob Knight, J. Gregory Caporaso, Gavin A. Huttley
Publicado 2019

Associations among Wine Grape Microbiome, Metabolome, and Fermentation Behavior Suggest Microbial Contribution to Regional Wine Characteristics

por Nicholas A. Bokulich, Thomas S. Collins, Chad Masarweh, Greg Allen, Hildegarde Heymann, Susan E. Ebeler, David A. Mills
Publicado 2016

RESCRIPt: Reproducible sequence taxonomy reference database management.

por Michael S Robeson, Devon R O'Rourke, Benjamin D Kaehler, Michal Ziemski, Matthew R Dillon, Jeffrey T Foster, Nicholas A Bokulich
Publicado 2021

RESCRIPt: Reproducible sequence taxonomy reference database management

por Michael S. Robeson, Devon R. O’Rourke, Benjamin D. Kaehler, Michal Ziemski, Matthew R. Dillon, Jeffrey T. Foster, Nicholas A. Bokulich
Publicado 2021

q2-longitudinal: Longitudinal and Paired-Sample Analyses of Microbiome Data

por Nicholas A. Bokulich, Matthew R. Dillon, Yilong Zhang, Jai Ram Rideout, Evan Bolyen, Huilin Li, Paul S. Albert, J. Gregory Caporaso
Publicado 2018

mockrobiota: a Public Resource for Microbiome Bioinformatics Benchmarking

por Nicholas A. Bokulich, Jai Ram Rideout, William G. Mercurio, Arron Shiffer, Benjamin Wolfe, Corinne F. Maurice, Rachel J. Dutton, Peter J. Turnbaugh, Rob Knight, J. Gregory Caporaso
Publicado 2016

The Soil Microbiome Influences Grapevine-Associated Microbiota

por Iratxe Zarraonaindia, Sarah M. Owens, Pamela Weisenhorn, Kristin West, Jarrad Hampton-Marcell, Simon Lax, Nicholas A. Bokulich, David A. Mills, Gilles Martin, Safiyh Taghavi, Daniel van der Lelie, Jack A. Gilbert
Publicado 2015

An Early Pandemic Analysis of SARS-CoV-2 Population Structure and Dynamics in Arizona

por Jason T. Ladner, Brendan B. Larsen, Jolene R. Bowers, Crystal M. Hepp, Evan Bolyen, Megan Folkerts, Krystal Sheridan, Ashlyn Pfeiffer, Hayley Yaglom, Darrin Lemmer, Jason W. Sahl, Emily A. Kaelin, Rabia Maqsood, Nicholas A. Bokulich, Grace Quirk, Thomas D. Watts, Kenneth K. Komatsu, Victor Waddell, Efrem S. Lim, J. Gregory Caporaso, David M. Engelthaler, Michael Worobey, Paul Keim
Publicado 2020