Network Rewiring: Physiological Consequences of Reciprocally Exchanging the Physical Locations and Growth-Phase-Dependent Expression Patterns of the <italic toggle="yes">Salmonella...

by Marina M. Bogue, Aalap Mogre, Michael C. Beckett, Nicholas R. Thomson, Charles J. Dorman
Published 2020

Inhibitory Concentrations of Ciprofloxacin Induce an Adaptive Response Promoting the Intracellular Survival of Salmonella enterica Serovar Typhimurium

by Sushmita Sridhar, Sally Forrest, Derek Pickard, Claire Cormie, Emily A. Lees, Nicholas R. Thomson, Gordon Dougan, Stephen Baker
Published 2021

Exploring bacterial diversity via a curated and searchable snapshot of archived DNA sequences.

by Grace A Blackwell, Martin Hunt, Kerri M Malone, Leandro Lima, Gal Horesh, Blaise T F Alako, Nicholas R Thomson, Zamin Iqbal
Published 2021

Exploring bacterial diversity via a curated and searchable snapshot of archived DNA sequences

by Grace A. Blackwell, Martin Hunt, Kerri M. Malone, Leandro Lima, Gal Horesh, Blaise T. F. Alako, Nicholas R. Thomson, Zamin Iqbal
Published 2021

Complement Susceptibility in Relation to Genome Sequence of Recent <named-content content-type="genus-species">Klebsiella pneumoniae</named-content> Isolates from Thai Hospitals

by Jessica Loraine, Eva Heinz, Jessica De Sousa Almeida, Oleksandr Milevskyy, Supayang P. Voravuthikunchai, Potjanee Srimanote, Pattarachai Kiratisin, Nicholas R. Thomson, Peter W. Taylor
Published 2018

Genomic epidemiology of syphilis reveals independent emergence of macrolide resistance across multiple circulating lineages

by Mathew A. Beale, Michael Marks, Sharon K. Sahi, Lauren C. Tantalo, Achyuta V. Nori, Patrick French, Sheila A. Lukehart, Christina M. Marra, Nicholas R. Thomson
Published 2019

Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei

by Jane Hawkey, Kalani Paranagama, Kate S. Baker, Rebecca J. Bengtsson, François-Xavier Weill, Nicholas R. Thomson, Stephen Baker, Louise Cerdeira, Zamin Iqbal, Martin Hunt, Danielle J. Ingle, Timothy J. Dallman, Claire Jenkins, Deborah A. Williamson, Kathryn E. Holt
Published 2021

Genomics of the Argentinian cholera epidemic elucidate the contrasting dynamics of epidemic and endemic Vibrio cholerae

by Matthew J. Dorman, Daryl Domman, Tomás Poklepovich, Charlotte Tolley, Gisella Zolezzi, Leanne Kane, María Rosa Viñas, Marcela Panagópulo, Miriam Moroni, Norma Binsztein, María Inés Caffer, Simon Clare, Gordon Dougan, George P. C. Salmond, Julian Parkhill, Josefina Campos, Nicholas R. Thomson
Published 2020

Genome and Transcriptome Adaptation Accompanying Emergence of the Definitive Type 2 Host-Restricted <named-content content-type="genus-species">Salmonella enterica</named-content>...

by Robert A. Kingsley, Sally Kay, Thomas Connor, Lars Barquist, Leanne Sait, Kathryn E. Holt, Karthi Sivaraman, Thomas Wileman, David Goulding, Simon Clare, Christine Hale, Aswin Seshasayee, Simon Harris, Nicholas R. Thomson, Paul Gardner, Wolfgang Rabsch, Paul Wigley, Tom Humphrey, Julian Parkhill, Gordon Dougan
Published 2013

Evolutionary histories and antimicrobial resistance in Shigella flexneri and Shigella sonnei in Southeast Asia

by Hao Chung The, Ladaporn Bodhidatta, Duy Thanh Pham, Carl J. Mason, Tuyen Ha Thanh, Phat Voong Vinh, Paul Turner, Sopheak Hem, David A. B. Dance, Paul N. Newton, Rattanaphone Phetsouvanh, Viengmon Davong, Guy E. Thwaites, Nicholas R. Thomson, Stephen Baker, Maia A. Rabaa
Published 2021

Chlamydia trachomatis from Australian Aboriginal people with trachoma are polyphyletic composed of multiple distinctive lineages

by Patiyan Andersson, Simon R. Harris, Helena M. B. Seth Smith, James Hadfield, Colette O’Neill, Lesley T. Cutcliffe, Fiona P. Douglas, L. Valerie Asche, John D. Mathews, Susan I. Hutton, Derek S. Sarovich, Steven Y. C. Tong, Ian N. Clarke, Nicholas R. Thomson, Philip M. Giffard
Published 2016

Salmonella bongori provides insights into the evolution of the Salmonellae.

by Maria Fookes, Gunnar N Schroeder, Gemma C Langridge, Carlos J Blondel, Caterina Mammina, Thomas R Connor, Helena Seth-Smith, Georgios S Vernikos, Keith S Robinson, Mandy Sanders, Nicola K Petty, Robert A Kingsley, Andreas J Bäumler, Sean-Paul Nuccio, Inés Contreras, Carlos A Santiviago, Duncan Maskell, Paul Barrow, Tom Humphrey, Antonino Nastasi, Mark Roberts, Gad Frankel, Julian Parkhill, Gordon Dougan, Nicholas R Thomson
Published 2011

Citrobacter rodentium is an unstable pathogen showing evidence of significant genomic flux.

by Nicola K Petty, Theresa Feltwell, Derek Pickard, Simon Clare, Ana L Toribio, Maria Fookes, Kevin Roberts, Rita Monson, Satheesh Nair, Robert A Kingsley, Richard Bulgin, Siouxsie Wiles, David Goulding, Thomas Keane, Craig Corton, Nicola Lennard, David Harris, David Willey, Richard Rance, Lu Yu, Jyoti S Choudhary, Carol Churcher, Michael A Quail, Julian Parkhill, Gad Frankel, Gordon Dougan, George P C Salmond, Nicholas R Thomson
Published 2011

Dissecting the molecular evolution of fluoroquinolone-resistant Shigella sonnei

by Hao Chung The, Christine Boinett, Duy Pham Thanh, Claire Jenkins, Francois-Xavier Weill, Benjamin P. Howden, Mary Valcanis, Niall De Lappe, Martin Cormican, Sonam Wangchuk, Ladaporn Bodhidatta, Carl J. Mason, To Nguyen Thi Nguyen, Tuyen Ha Thanh, Vinh Phat Voong, Vu Thuy Duong, Phu Huong Lan Nguyen, Paul Turner, Ryan Wick, Pieter-Jan Ceyssens, Guy Thwaites, Kathryn E. Holt, Nicholas R. Thomson, Maia A. Rabaa, Stephen Baker
Published 2019

New Variant of Multidrug-Resistant <italic toggle="yes">Salmonella enterica</italic> Serovar Typhimurium Associated with Invasive Disease in Immunocompromised Patients in Vietnam

by Alison E. Mather, Tu Le Thi Phuong, Yunfeng Gao, Simon Clare, Subhankar Mukhopadhyay, David A. Goulding, Nhu Tran Do Hoang, Ha Thanh Tuyen, Nguyen Phu Huong Lan, Corinne N. Thompson, Nguyen Hoang Thu Trang, Juan Carrique-Mas, Ngo Tri Tue, James I. Campbell, Maia A. Rabaa, Duy Pham Thanh, Katherine Harcourt, Ngo Thi Hoa, Nguyen Vinh Trung, Constance Schultsz, Gabriel G. Perron, John E. Coia, Derek J. Brown, Chinyere Okoro, Julian Parkhill, Nicholas R. Thomson, Nguyen Van Vinh Chau, Guy E. Thwaites, Duncan J. Maskell, Gordon Dougan, Linda J. Kenney, Stephen Baker
Published 2018